PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW09489.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

HSF

Protein Properties

Length: 374aa MW: 42765.9 Da PI: 4.7814

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW09489.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	100.2	1.9e-31	44	149	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTT.....XTTSEEEEESXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekksks.....kekiweFkhksFkkgkkel 93 Fl+k+yei++d+++++++sws ++nsfvv++++ f ++Lp+yFkh+nf+SFvRQLn+Y + + +s +++ weF+++ F +g+++l RWW09489.1 44 FLMKTYEIVDDPSTDQVVSWSPSNNSFVVWNPHAFGMTLLPRYFKHNNFSSFVRQLNTYASISNVAHFIPPSScllkvDPDRWEFANEGFLRGQRHL 140 9******************999*******************************754433333333335654459************* PP XXXXXXXXX CS HSF_DNA-bind 94 lekikrkks 102 l++ikr+k+ RWW09489.1 141 LKTIKRRKQ 149 *****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
MDPNLNPVKE EHQEFSDASG SSTDVAVDPP KPMDGLHDVG PPPFLMKTYE IVDDPSTDQV 60 VSWSPSNNSF VVWNPHAFGM TLLPRYFKHN NFSSFVRQLN TYASISNVAH FIPPSSCLLK 120 VDPDRWEFAN EGFLRGQRHL LKTIKRRKQV SYPPLQQQPL SSFLEVGEFG LEGEINRLKR 180 DKQLLLTELV KLRQEQQNTR NHLKEMEEKV LATEQKQQQM MTFLARLMRN PSFLQQLVEQ 240 KERIKELEEA ISKKRRRPID RAPENDDVGT SGNQNLNIST KIEAKDIHDF HVEEVSGLGS 300 LALEMQGLIN ENNQEEFDLQ DVKSDGDLND EFWEDLLNEG IDGEKGRFET ESGGNEVVNM 360 LADKLGFLSS TNTR

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

MDPNLNPVKE EHQEFSDASG SSTDVAVDPP KPMDGLHDVG PPPFLMKTYE IVDDPSTDQV  60
VSWSPSNNSF VVWNPHAFGM TLLPRYFKHN NFSSFVRQLN TYASISNVAH FIPPSSCLLK  120
VDPDRWEFAN EGFLRGQRHL LKTIKRRKQV SYPPLQQQPL SSFLEVGEFG LEGEINRLKR  180
DKQLLLTELV KLRQEQQNTR NHLKEMEEKV LATEQKQQQM MTFLARLMRN PSFLQQLVEQ  240
KERIKELEEA ISKKRRRPID RAPENDDVGT SGNQNLNIST KIEAKDIHDF HVEEVSGLGS  300
LALEMQGLIN ENNQEEFDLQ DVKSDGDLND EFWEDLLNEG IDGEKGRFET ESGGNEVVNM  360
LADKLGFLSS TNTR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	141	147	LKTIKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22830.1	2e-99	HSF family protein