PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW09598.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

bHLH

Protein Properties

Length: 247aa MW: 27764.8 Da PI: 10.622

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW09598.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.6	2.6e-09	101	146	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h + ErrRR+r+ ++f+ Lr +l ++ +K +K+++L+ A e +k+Lq RWW09598.1 101 HLMKERRRRERLSQGFADLRFMLSHR-----PKGDKISVLRAARENLKELQ 146 7899*******************8.....6***************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 247 aa Download sequence
MDDYHDILSW AFSPPANTFD LLESLPCPLV LSTPAVPPPQ SAFLQYNACG GAAMSAGSGS 60 VGGGASNIHR RMIRFWQTVV MGVRVESWKE KTAGNSRGLR HLMKERRRRE RLSQGFADLR 120 FMLSHRPKGD KISVLRAARE NLKELQQARE KLWRRNKELE VMISGNVTEA EETTIEVQAE 180 SRSSSFESVF SVLHRLKQMG VKATAIRANF SGRALSVEVA TETKVEHFSK VMRSKHHEQA 240 LIGLFAW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	97	109	RGLRHLMKERRRR
2	105	110	ERRRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43650.1	6e-10	bHLH family protein