PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW09707.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

TCP

Protein Properties

Length: 464aa MW: 50769.8 Da PI: 7.2889

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW09707.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	106.3	4.7e-33	127	200	2	73
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..ssssa..sec 73 +g+kdrhsk++T++g RdRRvRl a++a++f+d+qd+LG+d++sk+++WL+q+ak+ai++l+++ + +a +c RWW09707.1 127 TGRKDRHSKVYTAKGVRDRRVRLAAHTAIQFYDVQDRLGYDRPSKAVDWLMQNAKTAIDQLADLprC--HApvDRC 200 79************************************************************99552..3322344 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MEAGMASLQS RPIAPLDLMH VDFGEDNDSS RRFPLLFPTS RPNNCLPALP NASSCFCRRL 60 TTQLKPASHA SLSHSPKAHS YPKATLLLPL RPSLMEESNR DCYKQHCQRR CTGELIEVPG 120 GHIVRSTGRK DRHSKVYTAK GVRDRRVRLA AHTAIQFYDV QDRLGYDRPS KAVDWLMQNA 180 KTAIDQLADL PRCHAPVDRC VVHELPLQDT SVGHNSIEPP MSDAGAVASL GYGFGSSSSS 240 LIPPSLDGDA IDDLVKPFPT VTAIASSPSS HAMTYHDYTP DLLLHACGRP QDLRLSLQFD 300 PSFRDHHHQS PDSTQQFFCS GTTNLAHATT WATCPVNKER MGWWNAANPC DGSGAGEFSY 360 NGALPPQSAA PRLVNAQAQL CTGREPLRSG NLSSLRAWTI PTAFHPSPAS AAADVFTSES 420 YAGFSGFQIP ERVQGEEPHN AIANDLQAAS SASRQWQKWK ENNE

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MEAGMASLQS RPIAPLDLMH VDFGEDNDSS RRFPLLFPTS RPNNCLPALP NASSCFCRRL  60
TTQLKPASHA SLSHSPKAHS YPKATLLLPL RPSLMEESNR DCYKQHCQRR CTGELIEVPG  120
GHIVRSTGRK DRHSKVYTAK GVRDRRVRLA AHTAIQFYDV QDRLGYDRPS KAVDWLMQNA  180
KTAIDQLADL PRCHAPVDRC VVHELPLQDT SVGHNSIEPP MSDAGAVASL GYGFGSSSSS  240
LIPPSLDGDA IDDLVKPFPT VTAIASSPSS HAMTYHDYTP DLLLHACGRP QDLRLSLQFD  300
PSFRDHHHQS PDSTQQFFCS GTTNLAHATT WATCPVNKER MGWWNAANPC DGSGAGEFSY  360
NGALPPQSAA PRLVNAQAQL CTGREPLRSG NLSSLRAWTI PTAFHPSPAS AAADVFTSES  420
YAGFSGFQIP ERVQGEEPHN AIANDLQAAS SASRQWQKWK ENNE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	1e-47	TCP family protein