PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW09886.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

Trihelix

Protein Properties

Length: 328aa MW: 35648.5 Da PI: 5.2489

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW09886.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	78.8	7.9e-25	30	128	1	85
trihelix 1 rWtkqevlaLiearremeerlrrgk.................lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyf 82 rWt+qe+l+Li+++r +e+r r + +p+W++vs+++r +g++r+p+qC+++w+nl++++kkike+e+k+ ++s + + RWW09886.1 30 RWTRQEILVLIQGKRVVESRGRGRGvgravggggggeegaaiPVEPKWASVSSYCRLHGVNRGPVQCRKRWSNLAGDFKKIKEWEGKG---KESFWTMR 125 8*****************996444567788888999998899****************************************97...34457666 PP trihelix 83 dql 85 ++l RWW09886.1 126 SDL 128 665 PP

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence
MVNAVETGGS NGHNGGGDGG GGGRAPRLPR WTRQEILVLI QGKRVVESRG RGRGVGRAVG 60 GGGGGEEGAA IPVEPKWASV SSYCRLHGVN RGPVQCRKRW SNLAGDFKKI KEWEGKGKES 120 FWTMRSDLRR EKRLPGFFDR EVYDILDGAA GAAVAEEEGK NGSGRAAAAG AEEEEAVFDS 180 GRTAAEDGLF SDFDEEKEGE EDEEEDSSPP LQPVAAVPIS GKWTNYLICF NYAATTKDKQ 240 QDYNPEKGSP SREGQKRRRT SPEGAEDNDL QNRLIKVLEM NSRMLTAQLE AQNINCQLDR 300 DQRKDQTNSL LAVLGKLADA LGRIADKL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	49	58	RGRGRGVGRA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	1e-64	Trihelix family protein