PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW10177.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

LBD

Protein Properties

Length: 209aa MW: 22695 Da PI: 8.5833

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW10177.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	133.7	7.1e-42	39	138	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrr+Ca++C+++pyf ++p+kfa vhk+FGasnv+k+l +++e++r da++slvyeA++r+rdP+yG++gvi++lqqq++ l+aela++k+ RWW10177.1 39 PCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVTKMLMEVSESQRADAANSLVYEADIRLRDPIYGCMGVISALQQQVQVLEAELAVVKT 137 7***********************************************************************************************998 PP DUF260 100 e 100 e RWW10177.1 138 E 138 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 209 aa Download sequence
MLCHREKLDE VGKKIKREAD VSDHMTRPGP VGTLNKVTPC AACKLLRRRC AQECPFSPYF 60 SPHEPHKFAS VHKVFGASNV TKMLMEVSES QRADAANSLV YEADIRLRDP IYGCMGVISA 120 LQQQVQVLEA ELAVVKTEIL KHKYRQTNVA ILPASHATAL LASSVAISVA APPRLPTTAP 180 ATSSSSMYTA ASSSTDYSSI TNENVAYFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40470.1	3e-71	LBD family protein