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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RWW10209.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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| Family | WRKY | ||||||||
| Protein Properties | Length: 358aa MW: 38472 Da PI: 9.9206 | ||||||||
| Description | WRKY family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | WRKY | 61.9 | 1.1e-19 | 290 | 340 | 3 | 58 |
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58
D+y+WrKYGqK++kgs++p + Cp++k+ver+ +dp+++++tYegeH h
RWW10209.1 290 DEYSWRKYGQKPIKGSPYPS-----ILRWCPARKHVERALDDPTMLIVTYEGEHCH 340
9*****************96.....4679*************************99 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 358 aa Download sequence |
MRSRPSDEEV PFDFSLMPLF PLNEFNPPPS SPFSSAELWG GVGGGGLGLG VMAVDLLGYA 60 KMDEQMAIQE AATAGLRSME SLLSQLSHHH QQSPQLDCRE ITDLTVSKFK KVISILDRTG 120 HARFRRGPSP APAAEPAPRA VALAPAKPPQ PLIPPPPRSM TLDFTKPVAA PSLVEASGSQ 180 FTAEGFSIST SMTSASVTGD GSISNSKIGS ASLLLRPAAV STGKPPLSSS FKKRCHEHAH 240 SEHVTGKHAI PGDRCHCSKR RSGVTRRKSR VKRTIRVPAI SPKMADIPPD EYSWRKYGQK 300 PIKGSPYPSI LRWCPARKHV ERALDDPTML IVTYEGEHCH GHGNAAPPET ANAPVVAV |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT4G31550.2 | 5e-88 | WRKY family protein | ||||




