PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW10429.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

GRAS

Protein Properties

Length: 522aa MW: 57923 Da PI: 4.6016

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW10429.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	371.5	1.1e-113	218	522	2	308
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100 ++lL++cA a+s+g++e+aqa++++l++++s +gdp qRlaay++e+Laar+a+s++++ykal+++e + +s++l+a+++++ev+P++kf++++aN RWW10429.1 218 KQLLFDCAAAISEGSMEEAQAIITELRQIVSIQGDPPQRLAAYMVEGLAARIASSGQGIYKALRCKEPP---TSDRLSAMQILFEVCPCFKFGYVAANY 313 589***************************************************************9...9********************** PP GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197 +I+ea+ ee+vHiiDfdi+qG Q+++L+qaL++ p++pp+lRi gv++pes+ le +g+rL+k+Aeelgvpfef++ +a +++d+++e+L+++ RWW10429.1 314 TIVEALRDEEKVHIIDFDINQGSQYINLIQALSTWPSKPPHLRISGVDDPESVqrAVGGLEIIGQRLEKLAEELGVPFEFQA-IAAKTSDVTPEMLDCR 411 ***********************************************99878889*******************.6999******** PP GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296 gEal++n+++qlh+++desvs+ ++rd++L++vk+lsPk+v+++eq++++n+++F+ rf+e +yy+a+f+sl+a+lpr+s +r++vEr++l+r+ivn RWW10429.1 412 LGEALVINFAFQLHHMPDESVSTVNQRDQMLRMVKGLSPKLVTLIEQDMNTNTAPFFPRFVEVYNYYTAVFESLDATLPRDSTDRMNVERQCLARDIVN 510 *********************************************************************************************** PP GRAS 297 vvacegaerrer 308 +vacega+r+er RWW10429.1 511 IVACEGADRIER 522 *******998 PP

Sequence ? help Back to Top
Protein Sequence Length: 522 aa Download sequence
MSMIRSVDSS TANGDSNLHA HKSGGGENSD LSRQILSTDK RMYHYRPASY KPDLHPQQHF 60 IDSSSKMIHV DPLDMSTSSI PEHYSQVSSA PYQLIANFRS SILSENPYSS CIAAAQCPES 120 SAGSNVSHQG SHSLSDYPSP EQEIDYGRLD IKLKLQELEQ ALLNDNDEDL VDSDQVAGIE 180 DNWTEPIKNL LVPCSPKESS SDSSISRIGS NREPRTPKQL LFDCAAAISE GSMEEAQAII 240 TELRQIVSIQ GDPPQRLAAY MVEGLAARIA SSGQGIYKAL RCKEPPTSDR LSAMQILFEV 300 CPCFKFGYVA ANYTIVEALR DEEKVHIIDF DINQGSQYIN LIQALSTWPS KPPHLRISGV 360 DDPESVQRAV GGLEIIGQRL EKLAEELGVP FEFQAIAAKT SDVTPEMLDC RLGEALVINF 420 AFQLHHMPDE SVSTVNQRDQ MLRMVKGLSP KLVTLIEQDM NTNTAPFFPR FVEVYNYYTA 480 VFESLDATLP RDSTDRMNVE RQCLARDIVN IVACEGADRI ER

Sequence ? help Back to Top

Protein Sequence Length: 522 aa Download sequence

MSMIRSVDSS TANGDSNLHA HKSGGGENSD LSRQILSTDK RMYHYRPASY KPDLHPQQHF  60
IDSSSKMIHV DPLDMSTSSI PEHYSQVSSA PYQLIANFRS SILSENPYSS CIAAAQCPES  120
SAGSNVSHQG SHSLSDYPSP EQEIDYGRLD IKLKLQELEQ ALLNDNDEDL VDSDQVAGIE  180
DNWTEPIKNL LVPCSPKESS SDSSISRIGS NREPRTPKQL LFDCAAAISE GSMEEAQAII  240
TELRQIVSIQ GDPPQRLAAY MVEGLAARIA SSGQGIYKAL RCKEPPTSDR LSAMQILFEV  300
CPCFKFGYVA ANYTIVEALR DEEKVHIIDF DINQGSQYIN LIQALSTWPS KPPHLRISGV  360
DDPESVQRAV GGLEIIGQRL EKLAEELGVP FEFQAIAAKT SDVTPEMLDC RLGEALVINF  420
AFQLHHMPDE SVSTVNQRDQ MLRMVKGLSP KLVTLIEQDM NTNTAPFFPR FVEVYNYYTA  480
VFESLDATLP RDSTDRMNVE RQCLARDIVN IVACEGADRI ER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21450.1	1e-168	GRAS family protein