PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW10533.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 592aa MW: 64848.1 Da PI: 8.6351

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW10533.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	21.7	5.2e-07	387	407	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++Cgk F+r nL+ H+r H RWW10533.1 387 CEICGKGFKRDANLRMHMRAH 407 *******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 592 aa Download sequence
MLMQSLASAD RYYPLLIFLH HHSFFSVASP PSIATGISSL SPSRPLVSTA SFSAASSLPP 60 PPSLYDGMFL HISPYGTREW TGTGPVPKLK VLLCLQEAQK RMKIKKPPHI LVIHLKRFKY 120 IEQLGRYKKL SYRVVFPMEL KLTNTVEDAE SEYSLFAVVV HVGSGPNHEG KTLTRLEIPL 180 SHLSRLQRST RHGAASPSKK LSPFSSPPLP SSPLKMDGSG GRNRGQELSL PLGACGGGCD 240 PGGAPLASHD PFLPLLNLSA LGQKMDSLRR FLSDAIDSRT VIGDDQLQMV SSHIASAVQG 300 IILNGAALLA SSQPLNPSSS FAAAGGPTSQ DSVTPRFAET RSGSPPSIQF ENGSEPPTSD 360 PATVIGEDDD IVEIDAAELL AEHVHLCEIC GKGFKRDANL RMHMRAHGDR FKTLEALSKP 420 DREVRLSDGG EAVPRRSVRF SCPYPGCNRN RAHKKFRPLK SVACVKNHFK RSHCPKMYSC 480 HRCNKKNFSV VADLRSHLKH CGVPRWRCSC GTSFSRKDKL FGHITLFEGH MPAVEVGAEE 540 EVKKKGVILE ADEEEDEGVG GTEQDIEGFD SEFLKGIMED FDDIERRSGR MR

Sequence ? help Back to Top

Protein Sequence Length: 592 aa Download sequence

MLMQSLASAD RYYPLLIFLH HHSFFSVASP PSIATGISSL SPSRPLVSTA SFSAASSLPP  60
PPSLYDGMFL HISPYGTREW TGTGPVPKLK VLLCLQEAQK RMKIKKPPHI LVIHLKRFKY  120
IEQLGRYKKL SYRVVFPMEL KLTNTVEDAE SEYSLFAVVV HVGSGPNHEG KTLTRLEIPL  180
SHLSRLQRST RHGAASPSKK LSPFSSPPLP SSPLKMDGSG GRNRGQELSL PLGACGGGCD  240
PGGAPLASHD PFLPLLNLSA LGQKMDSLRR FLSDAIDSRT VIGDDQLQMV SSHIASAVQG  300
IILNGAALLA SSQPLNPSSS FAAAGGPTSQ DSVTPRFAET RSGSPPSIQF ENGSEPPTSD  360
PATVIGEDDD IVEIDAAELL AEHVHLCEIC GKGFKRDANL RMHMRAHGDR FKTLEALSKP  420
DREVRLSDGG EAVPRRSVRF SCPYPGCNRN RAHKKFRPLK SVACVKNHFK RSHCPKMYSC  480
HRCNKKNFSV VADLRSHLKH CGVPRWRCSC GTSFSRKDKL FGHITLFEGH MPAVEVGAEE  540
EVKKKGVILE ADEEEDEGVG GTEQDIEGFD SEFLKGIMED FDDIERRSGR MR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	100	106	KRMKIKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34370.3	9e-67	C2H2 family protein