PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW10842.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

TCP

Protein Properties

Length: 694aa MW: 74430.2 Da PI: 7.8655

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW10842.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	118.5	8.5e-37	53	133	2	81
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssss 81 a+k+ +++++hTkv+gR+RRvR++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i+++tg++s++a ++++ ss RWW10842.1 53 APKRISNKDRHTKVEGRGRRVRMPALCAARIFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGSIPALVLtSSSAGASS 133 689999**********************************************************99999333111111111 PP

Sequence ? help Back to Top
Protein Sequence Length: 694 aa Download sequence
MNPQVSPKLP QGLVVDSAVQ ESIDRQVVMA SQPNGDAQLQ PTVEKGEQRR HLAPKRISNK 60 DRHTKVEGRG RRVRMPALCA ARIFQLTREL GHKTDGETIQ WLLQQAEPSI IAATGSGSIP 120 ALVLTSSSAG ASSTPTASAT ASVGLHHYNL QELGQSRANW AMLGSNLGRS HPEFWMTPVD 180 GSNGSFLQSA TAAVPLVSNM PRFGFSGLEL PTGGVNPMTF VPLLGGQRQP IPGLEISRER 240 GRDMAGLAGV GLSWRSSTPS LLPPTSTKPS RAGPRVSIAV RNAISVEGKS YTLQKSEEIF 300 NAAKVLSLLP CPFEKGDFRS PHVPFLLFDF SHDCAEMERV NAALIEALKK GTSFGAPCVL 360 ENVLAEMVIS AVPSIEMVRF VNSGTEACMG VLRLARAFTD RPKIIKFEGC YHGHADPYLV 420 KAGSGVATLG LPDSPGVPKG ATVDTLTSPY NDLETIKSLF DTHKGEVAAV ILEPVVGNAG 480 FITPKPDFLN GLREITKQDG ALLIFDEVMT GFRLAYGGAQ EYFGITPDLT TLGKVIGGGL 540 PVGAYGGRKD IMQMVAPAGP MYQAGTLSGN PLAMTAGIHT LRRLMELGSY DYLEKISSDL 600 VNGILDAGKR AGHEMCGGSI RGMFGFFFTE GPVYNFQDAK MSDTAKFARF YRGMLEEGVY 660 LAPSQFEAGF TSLAHTSKDI EQTVEAAERV FRRI

Sequence ? help Back to Top

Protein Sequence Length: 694 aa Download sequence

MNPQVSPKLP QGLVVDSAVQ ESIDRQVVMA SQPNGDAQLQ PTVEKGEQRR HLAPKRISNK  60
DRHTKVEGRG RRVRMPALCA ARIFQLTREL GHKTDGETIQ WLLQQAEPSI IAATGSGSIP  120
ALVLTSSSAG ASSTPTASAT ASVGLHHYNL QELGQSRANW AMLGSNLGRS HPEFWMTPVD  180
GSNGSFLQSA TAAVPLVSNM PRFGFSGLEL PTGGVNPMTF VPLLGGQRQP IPGLEISRER  240
GRDMAGLAGV GLSWRSSTPS LLPPTSTKPS RAGPRVSIAV RNAISVEGKS YTLQKSEEIF  300
NAAKVLSLLP CPFEKGDFRS PHVPFLLFDF SHDCAEMERV NAALIEALKK GTSFGAPCVL  360
ENVLAEMVIS AVPSIEMVRF VNSGTEACMG VLRLARAFTD RPKIIKFEGC YHGHADPYLV  420
KAGSGVATLG LPDSPGVPKG ATVDTLTSPY NDLETIKSLF DTHKGEVAAV ILEPVVGNAG  480
FITPKPDFLN GLREITKQDG ALLIFDEVMT GFRLAYGGAQ EYFGITPDLT TLGKVIGGGL  540
PVGAYGGRKD IMQMVAPAGP MYQAGTLSGN PLAMTAGIHT LRRLMELGSY DYLEKISSDL  600
VNGILDAGKR AGHEMCGGSI RGMFGFFFTE GPVYNFQDAK MSDTAKFARF YRGMLEEGVY  660
LAPSQFEAGF TSLAHTSKDI EQTVEAAERV FRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	1e-42	TCP family protein