PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW10870.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 241aa MW: 27810 Da PI: 10.0717

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW10870.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31.5	4e-10	151	193	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 + +eEd +l av+ +G + W +a+++ gR + qc +rw+k l RWW10870.1 151 FGKEEDAKLRAAVEYYGDN-WQMVASCLE-GRVGPQCSNRWNKTL 193 568************77.*****.**********975 PP
2	Myb_DNA-binding	46.1	1.1e-14	201	241	2	43
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksr 43 grW+ +Ed++l+ av ++G ++W++Ia+ + gRt qc++r RWW10870.1 201 GRWSVDEDKRLKVAVMLFGAKNWNKIAQFAP-GRTQVQCRER 241 8****************************.******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence
SLREKPEKIL EEPEMVVIDD VCGPETPNRS TELSKEHGNS HAEPHFPEHP CSSNVKDLTS 60 SKFPKSAHNF VNALKKNRSC QKFIRRKLLE IEAKIEKNKE LKERVKCLMD FQVACKRKVA 120 NILYQKNDPR VTLISLKRPT SEKSSKVEML FGKEEDAKLR AAVEYYGDNW QMVASCLEGR 180 VGPQCSNRWN KTLNPERKKV GRWSVDEDKR LKVAVMLFGA KNWNKIAQFA PGRTQVQCRE 240 R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18100.1	5e-34	MYB family protein