PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW11267.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family M-type_MADS
Protein Properties Length: 248aa    MW: 27408.2 Da    PI: 9.5791
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW11267.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF59.25.1e-191765149
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                k+i+n+  r+v fskR++gi+ KA+ +S+LC+a+va++++s+ g+ y +
  RWW11267.1 17 KKIQNEDARHVCFSKRKAGIFAKASDISTLCGADVALVVYSPAGNPYSF 65
                689*****************************************98877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MAKKGVTSQG RRKIEIKKIQ NEDARHVCFS KRKAGIFAKA SDISTLCGAD VALVVYSPAG  60
NPYSFGSPAV EPVVDRFLSA SLIHAGSAHV VGGNHLTQQL NQQYMEISKQ LEAAKARKVM  120
LQERLAGVVK SQEIEWARNN IDHLGLEQLE KLKDAFERLK GRADARMQDI LLTGQRMALQ  180
QQQQQQQQQQ QPPPSMMGFG VPPVGAASSS TSYHPVWAFS SLQMPNQVEP DPYQAQWLGS  240
SLGYMHEP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.13e-32M-type_MADS family protein