PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW11315.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

HB-other

Protein Properties

Length: 538aa MW: 59188.8 Da PI: 6.9539

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW11315.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	65.3	8.3e-21	52	107	1	56
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 r++ +++t+ q++e+e+lF+++++p++++r +L+++lgL+ rqVk+WFqNrR+++k RWW11315.1 52 RKRYHRHTTRQIQEMEALFKECPHPDEKQRMKLSQELGLKPRQVKFWFQNRRTQMK 107 789999***********************************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 538 aa Download sequence
MVIGRGVSKE EEMESGSGSG PLDGVLSCGE EHDNELQQEP PSQQQQQPVA KRKRYHRHTT 60 RQIQEMEALF KECPHPDEKQ RMKLSQELGL KPRQVKFWFQ NRRTQMKVRP CFPYPCTMFP 120 SSASNFLIIN VVCPNCGGPA ILGEMSFDEQ QLRIENARLK DELLFYGQLE RLSCIASRYS 180 GRQLQPLGPA PPILLPSLDL DMGIYSRHFK DPPVVSCNDI VPVPQISDQP SPFSGMLILD 240 QDKPLVLDLA ITAADHLVRM CRTNGPLWIR RDGLTTEVLD LEEHAKTFSW PIDLKRQHGE 300 VRTEASRDSA MVIMNSITLV DAFLDSVTVS FHCLQGYNSS GVKSRSRCSW QWLLASGNLA 360 SAAPFCNFCL LWCLRARLIS SVTSNTIQKK VPGSLLISLS MASSMAFKRP SPGIGGGPLG 420 VSSKICPMGI PSYPFPGGKK EYDEAVTEND ENVLRHNSSH SVELLLQESG THPSGGSIVV 480 YATIDVDAVQ VAMSVPSAKL NLSSVTAINN HLRNTVQQIS AVLGGGAAVE PAAMPPEQ

Sequence ? help Back to Top

Protein Sequence Length: 538 aa Download sequence

MVIGRGVSKE EEMESGSGSG PLDGVLSCGE EHDNELQQEP PSQQQQQPVA KRKRYHRHTT  60
RQIQEMEALF KECPHPDEKQ RMKLSQELGL KPRQVKFWFQ NRRTQMKVRP CFPYPCTMFP  120
SSASNFLIIN VVCPNCGGPA ILGEMSFDEQ QLRIENARLK DELLFYGQLE RLSCIASRYS  180
GRQLQPLGPA PPILLPSLDL DMGIYSRHFK DPPVVSCNDI VPVPQISDQP SPFSGMLILD  240
QDKPLVLDLA ITAADHLVRM CRTNGPLWIR RDGLTTEVLD LEEHAKTFSW PIDLKRQHGE  300
VRTEASRDSA MVIMNSITLV DAFLDSVTVS FHCLQGYNSS GVKSRSRCSW QWLLASGNLA  360
SAAPFCNFCL LWCLRARLIS SVTSNTIQKK VPGSLLISLS MASSMAFKRP SPGIGGGPLG  420
VSSKICPMGI PSYPFPGGKK EYDEAVTEND ENVLRHNSSH SVELLLQESG THPSGGSIVV  480
YATIDVDAVQ VAMSVPSAKL NLSSVTAINN HLRNTVQQIS AVLGGGAAVE PAAMPPEQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G46880.1	3e-73	HD-ZIP family protein