PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW11323.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

LBD

Protein Properties

Length: 226aa MW: 25518.6 Da PI: 11.0398

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW11323.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	139.4	1.2e-43	11	109	1	99
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrrkC ++C++apyfp e+p+kfanvhk+FGasnv kll++l +++reda++sl+yeAear++dPvyG+vg i+ lq+q+++l++el+++++ RWW11323.1 11 PCAACKFLRRKCIPGCIFAPYFPPEEPHKFANVHKIFGASNVAKLLNELFPHQREDAVNSLAYEAEARVKDPVYGCVGAISVLQRQVQRLQKELDAANA 109 7*********************************************************************************************99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 226 aa Download sequence
MASSSSSSNS PCAACKFLRR KCIPGCIFAP YFPPEEPHKF ANVHKIFGAS NVAKLLNELF 60 PHQREDAVNS LAYEAEARVK DPVYGCVGAI SVLQRQVQRL QKELDAANAD LLRYACNDIP 120 MGLPVPPTMV SPMGAYRRTE FSRRIGNRGG PFEQSANQKR PTGVSTLKKK KKKKKKNKKR 180 SDLTTGKTKQ TAQKLQLLRH QKHRQAERDL SLWRRLHLSS HRKQAK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	168	174	KKKKKKK
2	168	176	KKKKKKKKK
3	168	179	KKKKKKKKKNKK
4	169	175	KKKKKKK
5	169	180	KKKKKKKKKNKK
6	170	176	KKKKKKK
7	170	181	KKKKKKKKKNKK
8	171	179	KKKKKKKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63090.2	1e-70	LBD family protein