PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW11437.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

Nin-like

Protein Properties

Length: 598aa MW: 67385.5 Da PI: 6.6303

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW11437.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	52.7	8.6e-17	304	330	26	52
RWP-RK 26 gvclTvLKriCRqyGIkRWPhRkiksl 52 vc+T+LKriCRq+GI RWP+Rki+++ RWW11437.1 304 SVCPTTLKRICRQHGITRWPSRKINKV 330 59***********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 598 aa Download sequence
MVLRTACESH RLPLAQTWIS CIQQGREGSR HSDESFKECV STVDEACYVQ DPSMLGFQQA 60 CSEHHLFRGQ GVVGKAFMTN QPCFSSDVTE FSKIEYPLSH HAKLFHLRAA VAIRLRCVHS 120 GNVDFVLEFF LPIHCTESEE QKLMLNSLSI AIQQVCHTLR VVTTRELEDE TMLENNEQIP 180 SDMFSDKSVS EIGQRYIVDE PLPSGTTPAV GIPKNVLPAS VPTARTKEFS VSTDWDPTDV 240 VLLPTGNIFS EFKRHHGESN DDYIFSFSAE TNVSNVEKAT EKRRAKTERT VSDVVKTDIF 300 GFFSVCPTTL KRICRQHGIT RWPSRKINKV DRSLRKLQVV IDSVHGPGEA FQLSSLYENF 360 IKNTRSDSNL ANGTTDSLSK QTDHHPESSN AKQQLEGRFT SHTSGTNSLS SSSCSQNSNS 420 SQRCSSEQRQ CDQTHEFEFR QTTLVEESQS DALNKVQIHV ELHCPTEVAP KSVGGLQSQR 480 PQIEHHPSGT MFLLTRNRCG FLKVKANYGE EKVIFRLQPT WGFQDLKQEI GRRFVIGDTT 540 SVDVKYLDED SEWILITCDE DLRECIDVHR STQAHTIKLS VHHVQRTNRS SLGSTALS

Sequence ? help Back to Top

Protein Sequence Length: 598 aa Download sequence

MVLRTACESH RLPLAQTWIS CIQQGREGSR HSDESFKECV STVDEACYVQ DPSMLGFQQA  60
CSEHHLFRGQ GVVGKAFMTN QPCFSSDVTE FSKIEYPLSH HAKLFHLRAA VAIRLRCVHS  120
GNVDFVLEFF LPIHCTESEE QKLMLNSLSI AIQQVCHTLR VVTTRELEDE TMLENNEQIP  180
SDMFSDKSVS EIGQRYIVDE PLPSGTTPAV GIPKNVLPAS VPTARTKEFS VSTDWDPTDV  240
VLLPTGNIFS EFKRHHGESN DDYIFSFSAE TNVSNVEKAT EKRRAKTERT VSDVVKTDIF  300
GFFSVCPTTL KRICRQHGIT RWPSRKINKV DRSLRKLQVV IDSVHGPGEA FQLSSLYENF  360
IKNTRSDSNL ANGTTDSLSK QTDHHPESSN AKQQLEGRFT SHTSGTNSLS SSSCSQNSNS  420
SQRCSSEQRQ CDQTHEFEFR QTTLVEESQS DALNKVQIHV ELHCPTEVAP KSVGGLQSQR  480
PQIEHHPSGT MFLLTRNRCG FLKVKANYGE EKVIFRLQPT WGFQDLKQEI GRRFVIGDTT  540
SVDVKYLDED SEWILITCDE DLRECIDVHR STQAHTIKLS VHHVQRTNRS SLGSTALS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17150.1	1e-104	Nin-like family protein