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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RWW11807.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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| Family | WRKY | ||||||||
| Protein Properties | Length: 245aa MW: 27472.8 Da PI: 6.2762 | ||||||||
| Description | WRKY family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | WRKY | 22.4 | 2.4e-07 | 115 | 157 | 22 | 59 |
EEEEEE-ST...T---EEEEEE-SS..STTEEEEEEES--SS- CS
WRKY 22 rsYYrCtsa...gCpvkkkversae..dpkvveitYegeHnhe 59
r+YYrC ++ gC +kk v r ++ d + + Y+ +H+++
RWW11807.1 115 RNYYRCVFRdkqGCLAKKTVHRVDNfgDSPRFSVEYRATHTCK 157
9******998889*********886448889**********97 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 245 aa Download sequence |
MKEKKTAPRH ESAGPSACNH SMAIQDINRA LELLSQLHAV LLQLHPSNGG DMLEEIRRFT 60 SRAVSRLQSC VCGSSVASED SLRDMYGNGK RKSLKTSWFS QYINSGCNAC FHGHRNYYRC 120 VFRDKQGCLA KKTVHRVDNF GDSPRFSVEY RATHTCKTID VVLPSVMESA PKEASVHASG 180 FRCTLEPQEN HLSPLAHAAI EAQDEGLWIS DQAQDCELLG SDMMATEPWD LDMFLEDDDG 240 WYNVQ |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT4G11070.2 | 8e-11 | WRKY family protein | ||||




