PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW11871.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MIKC_MADS

Protein Properties

Length: 116aa MW: 13288.7 Da PI: 11.1458

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW11871.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	93	1.5e-29	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk nrqvtf+kRrng+lKKA+ELS+LCdaeva i+fss+g l+e++s RWW11871.1 9 KRIENKVNRQVTFAKRRNGLLKKAYELSILCDAEVAAIVFSSRGSLFEFCS 59 79***********************************************96 PP
2	K-box	14.3	1.7e-06	81	112	68	99
K-box 68 kKnellleqieelqkkekelqeenkaLrkkle 99 k ++++++q+ +l++ e++l e nk+Lr+k+ RWW11871.1 81 KVTQVVIDQLTNLKREEEMLLESNKTLRRKVR 112 5689*************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 116 aa Download sequence
MGRGRVELKR IENKVNRQVT FAKRRNGLLK KAYELSILCD AEVAAIVFSS RGSLFEFCSS 60 SSSLPLIVVL IFKIINAFMR KVTQVVIDQL TNLKREEEML LESNKTLRRK VRQKGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G24260.3	9e-27	MIKC_MADS family protein