PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW11970.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

CO-like

Protein Properties

Length: 360aa MW: 38447.9 Da PI: 6.6377

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW11970.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	21.4	5.2e-07	18	59	4	39
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 r+C+ ++ + l+C+ + +lC C H+ H++ RWW11970.1 18 RRCDSCKVASALLYCRADAAYLCGGCDARVHEAnrlpsgHER 59 89****99****************99965667777765 PP
2	zf-B_box	28.1	4.1e-09	60	105	3	42
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 + C+ +e+ ++ C+ + lCe+C +H+ H++vp+ RWW11970.1 60 VWLCEVCEQAPAVVTCKADAAALCESCDADIHSAnplarrHERVPI 105 689****************************6689999999997 PP
3	CCT	68.2	2.1e-23	285	328	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea+++RY+eKrk+R+F+K+irY+sRKa+Ae+RpR+KGrF+k++ RWW11970.1 285 REARVMRYREKRKSRRFQKTIRYASRKAYAETRPRIKGRFAKRT 328 9*****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MAREAEGKEG YWTGLAARRC DSCKVASALL YCRADAAYLC GGCDARVHEA NRLPSGHERV 60 WLCEVCEQAP AVVTCKADAA ALCESCDADI HSANPLARRH ERVPIVPFLE PLAAHIKPSS 120 AAAAFPLGAG VCAGDGNNKE NNAGADASWI LPNPGHAHSR GLTGAPDLKS ADYFFSDVDP 180 YLDLEYASSM DARFHQMDSI VPVNGTAAGV DDRAPPLPSF LPTDAGVEHD FSPSKPSYST 240 HSTFSMSHSV SSSEAGVVPD GSGATADVTN PHGGVPEKAA AQMDREARVM RYREKRKSRR 300 FQKTIRYASR KAYAETRPRI KGRFAKRTEI EAEEDRIYSS AAAAAAALMA DAGYGVVPSF

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MAREAEGKEG YWTGLAARRC DSCKVASALL YCRADAAYLC GGCDARVHEA NRLPSGHERV  60
WLCEVCEQAP AVVTCKADAA ALCESCDADI HSANPLARRH ERVPIVPFLE PLAAHIKPSS  120
AAAAFPLGAG VCAGDGNNKE NNAGADASWI LPNPGHAHSR GLTGAPDLKS ADYFFSDVDP  180
YLDLEYASSM DARFHQMDSI VPVNGTAAGV DDRAPPLPSF LPTDAGVEHD FSPSKPSYST  240
HSTFSMSHSV SSSEAGVVPD GSGATADVTN PHGGVPEKAA AQMDREARVM RYREKRKSRR  300
FQKTIRYASR KAYAETRPRI KGRFAKRTEI EAEEDRIYSS AAAAAAALMA DAGYGVVPSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57660.1	1e-85	CO-like family protein