PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW11977.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 447aa MW: 49073.4 Da PI: 6.7077

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW11977.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.3	0.00012	358	380	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y Cp+C k+Fs+ L H r+H RWW11977.1 358 YHCPICRKVFSSGQALGGHKRSH 380 89******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence
MGTDQQEVKP HICKVCGRSF PCGRSLGGHM RSHMSLISPL QEVGEKPQSR KGLIAAGTGY 60 GLRENPKRTW RISERGGETL DNACSKCGKG HCDGSHGRAA QEEVEMDDVE QQDQGVEERD 120 GFSESQSYGE VTVLRKRRRS RRVTSIPCWS SSSSPHEFDK EQEDVALSLV MLSKGVGSWC 180 SVSSAEESLD RNLVVDTACQ GMDELKRLES DASDAEDELK MPKSHDSDDF DETSTTCFKK 240 KSSNRNADRV DAYDAKSSAK SVDIDLHKPP KQKNRYKCLI CNKSFHSYQA FGGHRSSHMR 300 MKASMEAGTY DGGSSTCKKS SIESNAYTAT KQTDEDSSSG RRGGAGAGSE ASKKLKEYHC 360 PICRKVFSSG QALGGHKRSH FLPNSSYEGA MVIQQHPSVM PNMLDLNVPA SVVDDDEDPK 420 LITDNIEAWW VKSGAAEHEP LVSLISN

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence

MGTDQQEVKP HICKVCGRSF PCGRSLGGHM RSHMSLISPL QEVGEKPQSR KGLIAAGTGY  60
GLRENPKRTW RISERGGETL DNACSKCGKG HCDGSHGRAA QEEVEMDDVE QQDQGVEERD  120
GFSESQSYGE VTVLRKRRRS RRVTSIPCWS SSSSPHEFDK EQEDVALSLV MLSKGVGSWC  180
SVSSAEESLD RNLVVDTACQ GMDELKRLES DASDAEDELK MPKSHDSDDF DETSTTCFKK  240
KSSNRNADRV DAYDAKSSAK SVDIDLHKPP KQKNRYKCLI CNKSFHSYQA FGGHRSSHMR  300
MKASMEAGTY DGGSSTCKKS SIESNAYTAT KQTDEDSSSG RRGGAGAGSE ASKKLKEYHC  360
PICRKVFSSG QALGGHKRSH FLPNSSYEGA MVIQQHPSVM PNMLDLNVPA SVVDDDEDPK  420
LITDNIEAWW VKSGAAEHEP LVSLISN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	135	139	RKRRR
2	135	140	RKRRRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60580.1	1e-20	C2H2 family protein