PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW12056.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family LBD
Protein Properties Length: 250aa    MW: 27274.4 Da    PI: 6.4099
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW12056.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260123.79.2e-39241241100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                 +C aCk+lrrkC+++Cv+apyf++eq  ++fa++hk+FGasn +kll +lp  +r++a+ ++ yeA+ar++dPvyG+v++i++lqqq+ +l+a+la+lk
  RWW12056.1  24 PCGACKFLRRKCVRGCVFAPYFCHEQgGAHFAAIHKVFGASNFSKLLLHLPVADRSEAAVTISYEAQARLQDPVYGCVAHIFALQQQVVNLQAQLASLK 122
                 7*************************88********************************************************************999 PP

      DUF260  99 ee 100
                 ++
  RWW12056.1 123 AQ 124
                 87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MLHSLATRNT ADFERPRMTG FGSPCGACKF LRRKCVRGCV FAPYFCHEQG GAHFAAIHKV  60
FGASNFSKLL LHLPVADRSE AAVTISYEAQ ARLQDPVYGC VAHIFALQQQ VVNLQAQLAS  120
LKAQAAQGLG SGSATNPTPQ EDKLSPFQQD GQRFFQTGDG GMLPPFSSIS SMSVENTNNY  180
SSGPSDPNYL QSSQEYDRHY EISDEHMPFG TEGGGSFAMA SPDMQTSTWR SAYHDMEDLQ  240
SIALAYLGRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42440.11e-51LBD family protein