PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW12159.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 439aa MW: 47255.1 Da PI: 8.0331

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW12159.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.5	0.0009	4	26	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C + Fs+ L H+r+H RWW12159.1 4 HACKLCFRGFSNGRALAGHMRSH 26 67********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 439 aa Download sequence
MDKHACKLCF RGFSNGRALA GHMRSHVIFA AGPPAPPQLH RDSSASVSSD RLVDEVLEEE 60 KQVGVSYGLR INPRKSFRLV DPEFSSSSSL AAVEPAGSGV VVQDLESETE SPRAHHRRAK 120 RLRREAASPL DPEPASSVSD TTPEEDVALC LMKLSRDSWA DGDEEEVDPR PRQPPRRGRS 180 RYQCGACKKV FRSYQALGGH RANHKKTNGC VPAVELRTCE ADSSDANLDV KVHECPFCFR 240 IFSSGQALGG HKRSHFMTSP PTVTDKLPTS VPPPSISLVT AATKCAGSIG LIDLNMPAPT 300 DDDVELSAIS GKAGDQMAAN STLVQSSIDA GSTFEIRVNC ELLLEPDSGV DSPSLGKKDS 360 RRVDCARSTA LWPVKPAQLE HQQKAYPNTA IALTTPSEYQ GNAITNREPR IPSSSVRTGR 420 GGSRKKEIAT GLSVAALSR

Sequence ? help Back to Top

Protein Sequence Length: 439 aa Download sequence

MDKHACKLCF RGFSNGRALA GHMRSHVIFA AGPPAPPQLH RDSSASVSSD RLVDEVLEEE  60
KQVGVSYGLR INPRKSFRLV DPEFSSSSSL AAVEPAGSGV VVQDLESETE SPRAHHRRAK  120
RLRREAASPL DPEPASSVSD TTPEEDVALC LMKLSRDSWA DGDEEEVDPR PRQPPRRGRS  180
RYQCGACKKV FRSYQALGGH RANHKKTNGC VPAVELRTCE ADSSDANLDV KVHECPFCFR  240
IFSSGQALGG HKRSHFMTSP PTVTDKLPTS VPPPSISLVT AATKCAGSIG LIDLNMPAPT  300
DDDVELSAIS GKAGDQMAAN STLVQSSIDA GSTFEIRVNC ELLLEPDSGV DSPSLGKKDS  360
RRVDCARSTA LWPVKPAQLE HQQKAYPNTA IALTTPSEYQ GNAITNREPR IPSSSVRTGR  420
GGSRKKEIAT GLSVAALSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45120.1	1e-41	C2H2 family protein