PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW12430.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family M-type_MADS
Protein Properties Length: 168aa    MW: 19104.2 Da    PI: 9.6124
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW12430.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF90.21.1e-28959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                k+ien +nrqvt+skRr+gi+KKA+EL vLCdaev++i+fsstgk+ ey+s
  RWW12430.1  9 KKIENPTNRQVTYSKRRTGIMKKAKELTVLCDAEVSIIMFSSTGKFSEYCS 59
                68***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MGRGKIEIKK IENPTNRQVT YSKRRTGIMK KAKELTVLCD AEVSIIMFSS TGKFSEYCSP  60
STEYINQPPP ASASFFSSSF HVELLFLALL SPPHVTAHCH DQHQEDIRSL PAGLRNQPVE  120
CTIRGKNYLR LRVLCLYMLS LIIKYHVIST QTDTYKKKVC SLHSSEPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54340.15e-28MIKC_MADS family protein