PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW12586.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 106aa MW: 11994.5 Da PI: 6.9195

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW12586.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.1	0.00029	37	59	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k Fs+ L H++ H RWW12586.1 37 FCCNYCSKKFSSYQGLGGHQNAH 59 78**************9999988 PP

Sequence ? help Back to Top
Protein Sequence Length: 106 aa Download sequence
MERKKRKETC VRPDHGLLLS VSNNSSVAEA ATHPLVFCCN YCSKKFSSYQ GLGGHQNAHK 60 LEREEAKEKS QRTQDLLSKI DEFSTKNSDP VVDESELLEV DLTLRL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	3	8	RKKRKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57520.1	1e-12	C2H2 family protein