PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW12606.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

SBP

Protein Properties

Length: 781aa MW: 86283.5 Da PI: 6.4633

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW12606.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	46.8	7.7e-15	165	200	1	36
--SSTT-----TT--HHHHHTT--HHHHT-S-EEET CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvs 36 +Cqv++C+adls+ak+yhrrhkvCe+hsk++++lv+ RWW12606.1 165 MCQVDDCRADLSSAKDYHRRHKVCEMHSKTAKALVE 200 6*****************************998875 PP

Sequence ? help Back to Top
Protein Sequence Length: 781 aa Download sequence
MEGEVGAQVA PPILFHHRQA LPGPFHETPL LLKKRDFPWK NNPSFQHNQQ QDSRQRLMSA 60 SLPDPSGNWN PKMWDWDSGR FVAKPSSSAS EILCLSSQPA SAAASVADKG DEGPKDSVLG 120 KSLEEDDQNL ALKLGGRAYS ADEPTTRPSK RVRSGSPGSG CNYPMCQVDD CRADLSSAKD 180 YHRRHKVCEM HSKTAKALVE LGSATKYLSS ESSNPMEERS PSSSPPVTKK LFPLHSTMDM 240 VKYSQASECQ EDKATVDLSP SHGGIAPLVL FKESETRVVN GTVQNLPYRV GYKSSGSDHS 300 PSSSNSDTQV LNWLSNSPSE MESYIRPGCV LVCVSPIAVV GGQETSLALK GRNLTVPGTN 360 PCSQLSFEFC GQVENGFKGN SFPVIIADDS ICRELSVLES DFEEDVQTPD VIPEEEVHNS 420 VLPRSREDAL HFLNELGWLF QRTQAPCSPL FTDFSSTRFK YLLTFSVEQD WCALIKTLLD 480 ILVERSLRDD TIKQESLKTL SEVKLLSRAV KRKCRKMVDL LLHYCVSHGQ DVTKVYLFTP 540 NMAGPGGITP LHMAASMQDS EDMVDALTND PQEIGLKCWD SLLDDNDQSP FMYAMLRNNL 600 SYNRLVERKL ADRANGQVTI QVEGGEISTD GSWVGGSNTH RAQNSQPSCA RCALVGTARL 660 RRNARSKGLL QRPYVHSLLA IAAVCVCVCV LFRGAPQIGS IEPFKWENLE QEKLEMSGLV 720 KKSFLTSEAL EKAGTRRQIR VGQAADRSWV GERWFPQASK AEEEKLNGLW ELTLPVLGRI 780 P

Sequence ? help Back to Top

Protein Sequence Length: 781 aa Download sequence

MEGEVGAQVA PPILFHHRQA LPGPFHETPL LLKKRDFPWK NNPSFQHNQQ QDSRQRLMSA  60
SLPDPSGNWN PKMWDWDSGR FVAKPSSSAS EILCLSSQPA SAAASVADKG DEGPKDSVLG  120
KSLEEDDQNL ALKLGGRAYS ADEPTTRPSK RVRSGSPGSG CNYPMCQVDD CRADLSSAKD  180
YHRRHKVCEM HSKTAKALVE LGSATKYLSS ESSNPMEERS PSSSPPVTKK LFPLHSTMDM  240
VKYSQASECQ EDKATVDLSP SHGGIAPLVL FKESETRVVN GTVQNLPYRV GYKSSGSDHS  300
PSSSNSDTQV LNWLSNSPSE MESYIRPGCV LVCVSPIAVV GGQETSLALK GRNLTVPGTN  360
PCSQLSFEFC GQVENGFKGN SFPVIIADDS ICRELSVLES DFEEDVQTPD VIPEEEVHNS  420
VLPRSREDAL HFLNELGWLF QRTQAPCSPL FTDFSSTRFK YLLTFSVEQD WCALIKTLLD  480
ILVERSLRDD TIKQESLKTL SEVKLLSRAV KRKCRKMVDL LLHYCVSHGQ DVTKVYLFTP  540
NMAGPGGITP LHMAASMQDS EDMVDALTND PQEIGLKCWD SLLDDNDQSP FMYAMLRNNL  600
SYNRLVERKL ADRANGQVTI QVEGGEISTD GSWVGGSNTH RAQNSQPSCA RCALVGTARL  660
RRNARSKGLL QRPYVHSLLA IAAVCVCVCV LFRGAPQIGS IEPFKWENLE QEKLEMSGLV  720
KKSFLTSEAL EKAGTRRQIR VGQAADRSWV GERWFPQASK AEEEKLNGLW ELTLPVLGRI  780
P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76580.1	1e-90	SBP family protein