PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW12628.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

TALE

Protein Properties

Length: 371aa MW: 41695.1 Da PI: 9.3325

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW12628.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	32	2.1e-10	306	338	23	55
SS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 23 rypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp++ee+++LA+k+gL+++q+ +WF N+R ++ RWW12628.1 306 PYPTEEEKAKLAEKTGLDQKQINNWFINQRKRH 338 8*****************************885 PP
2	ELK	34.8	3.5e-12	258	279	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++Ll+KYsgyL++L++EF+ RWW12628.1 258 ELKEMLLKKYSGYLSNLRKEFL 279 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
MEHRKYCGGN KRTRVPGEAE IRMKGICMNA GRKRACIHAS EGWVVKPGQQ QAASSSKRRQ 60 LLLMAREGRE GEKEEEETGR EEKGWYRGSH DDRRSSPWGA PEPSDQADAS CPPDAWPDSV 120 RHLFLRAFIY LVLLVLIVLI RLLLEATSQG RDGRSVQHTS GNTGGRGDAG CGVGVQLPGD 180 KRGVGGDGKQ RRWWVGSDGS DQSSDRQPPS LPLSSIRLHR LSEGIPTQEV IGSSEELCCG 240 DLETSEGQEC GSRLADQELK EMLLKKYSGY LSNLRKEFLK KRKKGKLPKD ARLMLLDWWN 300 THYRWPYPTE EEKAKLAEKT GLDQKQINNW FINQRKRHWK PSDDMRYALM EGVSGGSSGT 360 MLYFDRGAIG P

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

MEHRKYCGGN KRTRVPGEAE IRMKGICMNA GRKRACIHAS EGWVVKPGQQ QAASSSKRRQ  60
LLLMAREGRE GEKEEEETGR EEKGWYRGSH DDRRSSPWGA PEPSDQADAS CPPDAWPDSV  120
RHLFLRAFIY LVLLVLIVLI RLLLEATSQG RDGRSVQHTS GNTGGRGDAG CGVGVQLPGD  180
KRGVGGDGKQ RRWWVGSDGS DQSSDRQPPS LPLSSIRLHR LSEGIPTQEV IGSSEELCCG  240
DLETSEGQEC GSRLADQELK EMLLKKYSGY LSNLRKEFLK KRKKGKLPKD ARLMLLDWWN  300
THYRWPYPTE EEKAKLAEKT GLDQKQINNW FINQRKRHWK PSDDMRYALM EGVSGGSSGT  360
MLYFDRGAIG P

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	274	283	LRKEFLKKRK
2	280	284	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	8e-31	TALE family protein