PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW12671.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 246aa MW: 28452.4 Da PI: 9.9835

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW12671.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.6	1.1e-16	30	77	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+l+ ++ +G g+W++ ++ g+ R++k+c++rw +yl RWW12671.1 30 KGAWTKEEDERLIAHIRVHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 77 79****************************99**********97 PP
2	Myb_DNA-binding	57.7	2.7e-18	83	151	1	47
TSSS-HHHHHHHHHHHHHTTTT.......................-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.......................tWktIartmgkgRtlkqcksrwqky 47 rg++T+eEdel+++++ +lG++ +W++Ia++++ gRt++++k++w+++ RWW12671.1 83 RGNFTEEEDELIIKLHSLLGNKyvfdqltartpldaeltdsvprcRWSLIAARLP-GRTDNEIKNHWNTH 151 89***************************************************.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 246 aa Download sequence
MTRDVAAREK KKKKKNMGRS PCCEKAHTNK GAWTKEEDER LIAHIRVHGE GCWRSLPKAA 60 GLLRCGKSCR LRWINYLRPD LKRGNFTEEE DELIIKLHSL LGNKYVFDQL TARTPLDAEL 120 TDSVPRCRWS LIAARLPGRT DNEIKNHWNT HIRRKLLSRG VDPATHRPVN HRPPSNNITI 180 SFERREESSG WQQQQQQQQT QRPDLNLELC ISLPFQQEPH ELTEREKSLC FRGASAKTSL 240 ASAMEC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38620.1	1e-85	MYB family protein