PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW12965.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family NF-YC
Protein Properties Length: 177aa    MW: 20072.6 Da    PI: 5.8603
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW12965.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC171.87.4e-54511541101
       NF-YC   1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 
                 ql++fw++q   ie++tdf+nh+lPlarikki+kadedv+mi+aeaPv++++ace+filelt rsw haeenkrrtl+k+diaaa++rtd+fdfl+div
  RWW12965.1  51 QLQMFWADQcheIEQTTDFRNHSLPLARIKKIMKADEDVRMIAAEAPVVFARACEMFILELTHRSWAHAEENKRRTLQKNDIAAAISRTDVFDFLIDIV 149
                 89*****99999*************************************************************************************** PP

       NF-YC  97 prdel 101
                 pr+e 
  RWW12965.1 150 PREEG 154
                 **985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MDQQPGHPAP PVIGVATGVP YAAAAASGTY QAYQNLYHQQ QQQQQQQQQQ QLQMFWADQC  60
HEIEQTTDFR NHSLPLARIK KIMKADEDVR MIAAEAPVVF ARACEMFILE LTHRSWAHAE  120
ENKRRTLQKN DIAAAISRTD VFDFLIDIVP REEGKEDVAH ALGAPPSDPL SYYYVPK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1124130RRTLQKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56170.15e-63NF-YC family protein