PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW13326.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family GRAS
Protein Properties Length: 487aa    MW: 54562.3 Da    PI: 6.2946
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW13326.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS456.41.8e-1391174871374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lL++cA+av+++d+ ++++l+++l++++s +g+p+qRl ay++e+L arl++s+s++ykal+++e +   ss+ l+++++++ev+P++kf++l aN
  RWW13326.1 117 LKQLLIACARAVAENDMVNVEWLISELRQMVSVSGEPIQRLGAYLLEGLIARLSSSGSSIYKALKCKEPT---SSDLLSYMHILYEVCPYFKFGYLSAN 212
                 689******************************************************************9...9************************* PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                  aI eav+ge+++HiiDf+i qG QW++L+qaL++Rp+gpp++RiTgv++++s   +   l+ +g+rL+++A++ +vpfef+  +a +  d+el++L +
  RWW13326.1 213 GAIAEAVKGENMIHIIDFQIAQGSQWITLIQALSARPGGPPHIRITGVDDSNSAyaRGGGLHIVGQRLSRLAQSRNVPFEFHG-AAMSGCDVELKDLVI 310
                 **************************************************988899999************************.8999*********** PP

        GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
                 +pgEa+aVn+ +qlh+++desvs++++rd++L+lvkslsPkvv++veqe+++n+++F+ rfle+l+yy+a+f+s++++lpr+++eri+vE+++l+r+iv
  RWW13326.1 311 RPGEAVAVNFPFQLHHMPDESVSTRNHRDRLLRLVKSLSPKVVTLVEQESNTNTTPFFPRFLETLDYYAAMFESIDVTLPRDNKERISVEQHCLARDIV 409
                 *************************************************************************************************** PP

        GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 n+vace aer+erhe ++kW++r+ +aGFkp pls  +++++k+ll++++ + y +ee++g l+lgW++rpLv+ +aWr
  RWW13326.1 410 NIVACEDAERVERHELFGKWKSRFFMAGFKPCPLSPLVNATIKTLLQNYS-EHYWIEERDGVLYLGWRNRPLVVSCAWR 487
                 **************************************************.55*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 487 aa     Download sequence    
MAIPSAWLTG SWKRKPRSCS AELCWMCSTA TLSFSSTSGS PISQQDSQYD IVYGSSVSAS  60
CITEDPNDLK IRLREIETAM LGPDSDIVES FENNYPGNLS LEPETWRQVM GIPRGDLKQL  120
LIACARAVAE NDMVNVEWLI SELRQMVSVS GEPIQRLGAY LLEGLIARLS SSGSSIYKAL  180
KCKEPTSSDL LSYMHILYEV CPYFKFGYLS ANGAIAEAVK GENMIHIIDF QIAQGSQWIT  240
LIQALSARPG GPPHIRITGV DDSNSAYARG GGLHIVGQRL SRLAQSRNVP FEFHGAAMSG  300
CDVELKDLVI RPGEAVAVNF PFQLHHMPDE SVSTRNHRDR LLRLVKSLSP KVVTLVEQES  360
NTNTTPFFPR FLETLDYYAA MFESIDVTLP RDNKERISVE QHCLARDIVN IVACEDAERV  420
ERHELFGKWK SRFFMAGFKP CPLSPLVNAT IKTLLQNYSE HYWIEERDGV LYLGWRNRPL  480
VVSCAWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein