PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW13398.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

WOX

Protein Properties

Length: 216aa MW: 23885.8 Da PI: 8.7652

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW13398.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	49.5	7.2e-16	23	83	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+++eq+ +Le+ F++ +p ++e ++ k l ++ +++V++WFqNrR + ++ RWW13398.1 23 RTRWTPKPEQILILESIFNSgMVNPPKDETVRIRKLLeqfgSVGDANVFYWFQNRRSRSRR 83 89***************99***********************************997 PP
2	Wus_type_Homeobox	108	5.5e-35	23	85	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 rtRWtP+peQi iLe++++sG+++P+k+e+ ri++ Le++G ++d+NVfyWFQNr++R+r++q RWW13398.1 23 RTRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEQFGSVGDANVFYWFQNRRSRSRRRQ 85 79***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 216 aa Download sequence
MDDQNQDNYG GPNLQRSALE PLRTRWTPKP EQILILESIF NSGMVNPPKD ETVRIRKLLE 60 QFGSVGDANV FYWFQNRRSR SRRRQRQLQA SLMADPRAAG VVQHAGGAAT SSPSNSPGGG 120 FFACSSSTSA AASSSNFVID DNADDLFSIS RQMGFMEATQ TPPPFMCSSD VSHLHNQPGQ 180 SVHGFGVSDT IWPFLQILHK DMKQRLLGAV LFINNR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17810.1	3e-33	WOX family protein