PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW13776.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

bHLH

Protein Properties

Length: 619aa MW: 67727.4 Da PI: 7.1188

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW13776.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.8	8.3e-13	463	509	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI +Lq RWW13776.1 463 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAISYITELQ 509 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 619 aa Download sequence
MVEVELQGLG TGRGLNCGGG IGVGMGTFWS DEDRKMARSV LGHQAFDYLN ARHAAPSDWH 60 LTAVGGGDAD LQTKLQDLVE GPGSAAWAYA IFWQISRSDS GELVLGWGDG HCIETGNEEE 120 EEGCGSRRNP LNGAQQKMRK RVLERLHALS GGSDEENYAL RLDRITDTEM YFLASMYFSF 180 PKGEDASGRA LESGKHIWIS EAVLASPACS NHYVRAFLAR SAGFRTIIFV PFDFGVLELG 240 SVDLVPESFE ALHMIRSFFG HGLSKEAAAP GEKTDENNGP VSISRFGADS GRVAEYPKIF 300 GKDLKLGHAQ LKGRASIVSM EQRPSETIAK HGDHHQKNPL LQWNQNHLVN PHQQKLGNGA 360 PYVRYINGLM SPQKQALQPQ RQQALPRLLP PSGQIDFSSA AAAAAAAAKP AAAGTLIGRA 420 GAVDSELSDV EAPCKEHKPG GTEERRPRKR GRKPANGREE PLNHVEAERQ RREKLNQRFY 480 ALRAVVPNIS KMDKASLLGD AISYITELQK KLKEMEAERE MWGDPSRVDH KRRPPPHCPE 540 IDIQTAQDEV IVRVSCPPDT HPVSQVIQAL KDSQIDVVDS KVAATSDSVL HTFVVKSPAA 600 EKLTKEKLIA ALAHELRAT

Sequence ? help Back to Top

Protein Sequence Length: 619 aa Download sequence

MVEVELQGLG TGRGLNCGGG IGVGMGTFWS DEDRKMARSV LGHQAFDYLN ARHAAPSDWH  60
LTAVGGGDAD LQTKLQDLVE GPGSAAWAYA IFWQISRSDS GELVLGWGDG HCIETGNEEE  120
EEGCGSRRNP LNGAQQKMRK RVLERLHALS GGSDEENYAL RLDRITDTEM YFLASMYFSF  180
PKGEDASGRA LESGKHIWIS EAVLASPACS NHYVRAFLAR SAGFRTIIFV PFDFGVLELG  240
SVDLVPESFE ALHMIRSFFG HGLSKEAAAP GEKTDENNGP VSISRFGADS GRVAEYPKIF  300
GKDLKLGHAQ LKGRASIVSM EQRPSETIAK HGDHHQKNPL LQWNQNHLVN PHQQKLGNGA  360
PYVRYINGLM SPQKQALQPQ RQQALPRLLP PSGQIDFSSA AAAAAAAAKP AAAGTLIGRA  420
GAVDSELSDV EAPCKEHKPG GTEERRPRKR GRKPANGREE PLNHVEAERQ RREKLNQRFY  480
ALRAVVPNIS KMDKASLLGD AISYITELQK KLKEMEAERE MWGDPSRVDH KRRPPPHCPE  540
IDIQTAQDEV IVRVSCPPDT HPVSQVIQAL KDSQIDVVDS KVAATSDSVL HTFVVKSPAA  600
EKLTKEKLIA ALAHELRAT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	445	453	RRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	1e-128	bHLH family protein