PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW13911.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family SBP
Protein Properties Length: 221aa    MW: 24358.3 Da    PI: 8.6693
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW13911.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP70.14.3e-22175221248
                 -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSS CS
         SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsr 48 
                 CqvegC++dl++ak+yhr+hkvCe hsk+++v+v+g+e+rfCqqCsr
  RWW13911.1 175 CQVEGCNVDLTSAKDYHRKHKVCECHSKSSKVIVAGQERRFCQQCSR 221
                 **********************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MDWTLKTPLH WDWETLTLFS KKDAEIYKSA QQPDWRIQYA NGSGSGNSSD AGALSGSELG  60
NGSSRSSISA SIGSITKDGS ITPEFNFDSV EQYPENLKKN KDLARVETGI MHGVVASDGP  120
EKPLICLKIG KRTHLKDVSE GNNNKNPSFL SSTNLSTGLI KKSKVLQQHM QSSYCQVEGC  180
NVDLTSAKDY HRKHKVCECH SKSSKVIVAG QERRFCQQCS R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43270.15e-30SBP family protein