PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW14151.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

Whirly

Protein Properties

Length: 112aa MW: 12169.2 Da PI: 8.5071

Description

Whirly family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW14151.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Whirly	60.7	3e-19	3	59	56	110
Whirly 56 alsatevaelvdlaskesceffhdpaakgs..neGkvrkalkvePlpdGsGlfvnls 110 als+tev++l+ l++ esc+f+hdpa+k+s eG+v+k+l++ P+ dGsG+ + +s RWW14151.1 3 ALSPTEVGSLIALGPAESCDFLHDPAMKSSfsLEGQVKKSLSISPMKDGSGYVLHFS 59 8***********************99863269***************988765 PP
2	Whirly	22.1	2.4e-07	83	112	110	139
Whirly 110 svtnslvkgnesfsvPvskaefavlrsllv 139 +v n+++k+ne+f+vPv+kaef+++r++l+ RWW14151.1 83 AVVNNVQKTNERFVVPVTKAEFTAVRTVLS 112 578899********************9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 112 aa Download sequence
AIALSPTEVG SLIALGPAES CDFLHDPAMK SSFSLEGQVK KSLSISPMKD GSGYVLHFSK 60 PSINCLFPLQ LRNTIIFLCI WTAVVNNVQK TNERFVVPVT KAEFTAVRTV LS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G71260.1	2e-25	Whirly family protein