PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW14391.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 243aa MW: 28069.8 Da PI: 6.9185

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW14391.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.6	1.8e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++ Ed++l d+++ +G g+W ++++ g++R++ +c++rw++yl RWW14391.1 14 KGSWSATEDKILTDYIRAHGEGRWGKVPKGAGLNRCARSCRLRWLNYL 61 799*******************************************97 PP
2	Myb_DNA-binding	51.1	3.2e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + eE++l+++++++lG++ W++Ia +++ gRt++++k++w+++l RWW14391.1 67 RGNISLEEEDLIIRLHNLLGNR-WSLIAGRLP-GRTDNEIKNYWNTVL 112 78999***************.*****.**********975 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MGRNPCSSKE GFNKGSWSAT EDKILTDYIR AHGEGRWGKV PKGAGLNRCA RSCRLRWLNY 60 LRPDIKRGNI SLEEEDLIIR LHNLLGNRWS LIAGRLPGRT DNEIKNYWNT VLKKKAQGRS 120 ADMHSGEDEH MNSKSQETIR CPKFGNSSSR NDPPSFPHLG RNVFEESLID GDIFRETSFL 180 APEDCDLFNN PLMDSNYEEL CPRHFLDLNF FEIFESNLPE EHETLLWCRH NIVCILCIFV 240 LLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22640.1	3e-58	MYB family protein