PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW14663.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

bHLH

Protein Properties

Length: 703aa MW: 76693.8 Da PI: 4.9412

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW14663.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.3	2.5e-12	524	569	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr+++P+ K++Ka+ L A+ YI++L RWW14663.1 524 NHVEAERQRREKLNQRFYALRSVVPNV-----SKMDKASLLGDATTYINEL 569 799*********************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 703 aa Download sequence
MNLCADDSAS MMEALIATAS DLQGYPWAVV PPPLQPPAPV TPSDVSRSFS ATATALAPAP 60 YLDKEMLHER LQALIEGVRD SWTYAILWQS SVDTNTGESL LVWADGCYKG CEEDKRKQQP 120 AAASATSAAE QVRRKQVLRE LNSLIDGDEG SSSANEEAED EVTDTEWFFL VSMTQSFVNG 180 SGLPGQALFS GDPCWLAGAD RLAVAPCDRA RQATVFGIQT MVYVPVSPGV LELGSTQLIC 240 HSSKITSKIR ILFDFNSLQM PLANAAAGSF LSPLSLAAST AVNQSEIDPS ELWFADPSLV 300 EIKDFVLSNS ASVEISDSKP LIHFDRNHSS GTLRENPSPF QIQQSNDHSH QQQQQHQSSS 360 GNNSQTQPFS ARELNFSEFL HTSPAAPLQS VKPESDENVN FSDSKRNSSA AILSSNLFFS 420 RQMAAAVPDD NMNNSSTGAT SMPRSNDEAK LVLSSAPARP TSIALMKCSR GGGSIGDFLG 480 GADSDHSDSE RSMRKMESNL LTDPEKRPRK RGRKPANGRE EPLNHVEAER QRREKLNQRF 540 YALRSVVPNV SKMDKASLLG DATTYINELR VKLQSLESEK EDLEAQVEAL RKERQSPPAR 600 SPQLGETTNG NGRCYGVEIE VKMVDSEAMI LVQCQKTNHP TAMLMSALKD LNLDVYCASV 660 SVVKDLMIQQ ATVKMMSSRA YTQEQLSAAL YYRVAAEPPP ASR

Sequence ? help Back to Top

Protein Sequence Length: 703 aa Download sequence

MNLCADDSAS MMEALIATAS DLQGYPWAVV PPPLQPPAPV TPSDVSRSFS ATATALAPAP  60
YLDKEMLHER LQALIEGVRD SWTYAILWQS SVDTNTGESL LVWADGCYKG CEEDKRKQQP  120
AAASATSAAE QVRRKQVLRE LNSLIDGDEG SSSANEEAED EVTDTEWFFL VSMTQSFVNG  180
SGLPGQALFS GDPCWLAGAD RLAVAPCDRA RQATVFGIQT MVYVPVSPGV LELGSTQLIC  240
HSSKITSKIR ILFDFNSLQM PLANAAAGSF LSPLSLAAST AVNQSEIDPS ELWFADPSLV  300
EIKDFVLSNS ASVEISDSKP LIHFDRNHSS GTLRENPSPF QIQQSNDHSH QQQQQHQSSS  360
GNNSQTQPFS ARELNFSEFL HTSPAAPLQS VKPESDENVN FSDSKRNSSA AILSSNLFFS  420
RQMAAAVPDD NMNNSSTGAT SMPRSNDEAK LVLSSAPARP TSIALMKCSR GGGSIGDFLG  480
GADSDHSDSE RSMRKMESNL LTDPEKRPRK RGRKPANGRE EPLNHVEAER QRREKLNQRF  540
YALRSVVPNV SKMDKASLLG DATTYINELR VKLQSLESEK EDLEAQVEAL RKERQSPPAR  600
SPQLGETTNG NGRCYGVEIE VKMVDSEAMI LVQCQKTNHP TAMLMSALKD LNLDVYCASV  660
SVVKDLMIQQ ATVKMMSSRA YTQEQLSAAL YYRVAAEPPP ASR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	506	514	KRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32640.1	1e-126	bHLH family protein