PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW14705.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

HD-ZIP

Protein Properties

Length: 372aa MW: 42926.8 Da PI: 8.8769

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW14705.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	49	1e-15	63	101	18	56
HHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 18 lFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +F+ +++p++++r++L++ lgL+ rq+k+WFqNrR+++k RWW14705.1 63 MFKVCPHPDEKQRAQLSRDLGLEPRQIKFWFQNRRTQMK 101 79**********************************998 PP
2	START	23.3	1.3e-08	229	306	3	71
HHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGC CS START 3 aeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeq 71 a a++e++++++a+ep+Wvks ++++ +++ + f++s+ ++ea+r+s++v+m+++ l ++d + RWW14705.1 229 ATGAMEEVIRLVQADEPLWVKSGsdgrDILQLETYDRMFQRSNRqlrfpdTQTEASRDSAIVIMNATALIDMFMDAV-K 306 6679*****************9999977777777777766666889999***************999999988.3 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
MDSGDEQDVP DSQRRKKRYH RHTPRQIQEL EAYALLSSIS FALALALFVW CARRGYGARF 60 VMMFKVCPHP DEKQRAQLSR DLGLEPRQIK FWFQNRRTQM KATARCSLLF LFLFRSCSRW 120 NDWTLTLLLP KRRYFGLNDK IRCENIAMRE AMKNVICPSC GAPPASDDSY FDEQKLRMEN 180 ARLKEEVTNP GISPSLDLDL LCRNSSSAFP YTFPAAVSEL EKPLMMEMAT GAMEEVIRLV 240 QADEPLWVKS GSDGRDILQL ETYDRMFQRS NRQLRFPDTQ TEASRDSAIV IMNATALIDM 300 FMDAVKFRSS QKEMHSPYSI FELIWIMLQS KWAELFPTII SKARTIEVLA AGMAGSRSGY 360 LILVMTVLKL FS

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

MDSGDEQDVP DSQRRKKRYH RHTPRQIQEL EAYALLSSIS FALALALFVW CARRGYGARF  60
VMMFKVCPHP DEKQRAQLSR DLGLEPRQIK FWFQNRRTQM KATARCSLLF LFLFRSCSRW  120
NDWTLTLLLP KRRYFGLNDK IRCENIAMRE AMKNVICPSC GAPPASDDSY FDEQKLRMEN  180
ARLKEEVTNP GISPSLDLDL LCRNSSSAFP YTFPAAVSEL EKPLMMEMAT GAMEEVIRLV  240
QADEPLWVKS GSDGRDILQL ETYDRMFQRS NRQLRFPDTQ TEASRDSAIV IMNATALIDM  300
FMDAVKFRSS QKEMHSPYSI FELIWIMLQS KWAELFPTII SKARTIEVLA AGMAGSRSGY  360
LILVMTVLKL FS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G73360.1	6e-84	HD-ZIP family protein