PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW14836.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

HD-ZIP

Protein Properties

Length: 124aa MW: 14310.1 Da PI: 5.9992

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW14836.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.3	6.4e-19	21	74	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++++ q+++Le+ Fe ++++ e++ +LA++lgL+ rqV vWFqNrRa+ k RWW14836.1 21 KKRRLSAAQVRALERSFEVENKLEPERKLRLAQQLGLQPRQVAVWFQNRRARCK 74 45689***********************************************99 PP
2	HD-ZIP_I/II	125.4	2.6e-40	20	109	1	90
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 ekkrrls+ qv++LE+sFe e+kLeperK +la++LglqprqvavWFqnrRAR ktkqlE+dy+aL ++ydal+ + ++L++++e+L ++ RWW14836.1 20 EKKRRLSAAQVRALERSFEVENKLEPERKLRLAQQLGLQPRQVAVWFQNRRARCKTKQLERDYAALEANYDALRLDYDSLRRDKESLLTQ 109 69***********************************************************************************99866 PP

Sequence ? help Back to Top
Protein Sequence Length: 124 aa Download sequence
MLTEISESVV EDDEAAVQGE KKRRLSAAQV RALERSFEVE NKLEPERKLR LAQQLGLQPR 60 QVAVWFQNRR ARCKTKQLER DYAALEANYD ALRLDYDSLR RDKESLLTQA SHESIGSTVE 120 SYAI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	69	77	RRARCKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22430.1	8e-45	HD-ZIP family protein