PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW14844.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

Trihelix

Protein Properties

Length: 504aa MW: 56084.5 Da PI: 6.5446

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW14844.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	72.7	6.4e-23	125	237	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk..........................lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.t 72 +Wt+++v++Li+++ +++++ ++g +kk++W++vs++m+e gf +sp+qC++k+++lnkryk++++ +k+ + RWW14844.1 125 KWTDNMVRLLIKVVYRVGDDGGAGGegeqqahgalakgkksaaaaaasallQKKGKWKSVSRAMMENGFCVSPQQCEDKFNDLNKRYKRVNDLLGKGtA 223 7************999999986456678889999999999***************************************************55 PP trihelix 73 sessstcpyfdqle 86 ++++++ ++d ++ RWW14844.1 224 CRVVENQTLLDTMD 237 9******99998 PP

Sequence ? help Back to Top
Protein Sequence Length: 504 aa Download sequence
MDGRNGIPGG MLPSNMSSGG LMGLDMSLHP NQQQQQMLHH QQQLHAHHML PFRAPVGSDG 60 DHKAQHPNGH AQYVQAFGQA VRGKQQQPAM SSEEEAGYGE DVEEQARRRG VSQPSPSPSP 120 WQRMKWTDNM VRLLIKVVYR VGDDGGAGGE GEQQAHGALA KGKKSAAAAA ASALLQKKGK 180 WKSVSRAMME NGFCVSPQQC EDKFNDLNKR YKRVNDLLGK GTACRVVENQ TLLDTMDNLS 240 PKVKEEARKL LNSKHLFFSE MCAYHHAGGA SSCAAPPPPQ IPPPHPPDQQ QLCFHHPLPA 300 TAPPAKVPGD SRGRGTAAEE EGMAEEVDDE DDVDSEEDED DYEEEEDDDG VEGHGHKRHC 360 HHHQQQPKHE EGEEVEDSKG FTAGAKRLKK DSSQMSASPP HSLTLSSSSS IQQVLSEMMA 420 VSGGGEQQQR QWLRRKAAEL EEQRVAYQGR AFQLERQRFK WLRFSSNKER EMERMKLDNE 480 RLRLENGRML LLLRQKELEL VHGG

Sequence ? help Back to Top

Protein Sequence Length: 504 aa Download sequence

MDGRNGIPGG MLPSNMSSGG LMGLDMSLHP NQQQQQMLHH QQQLHAHHML PFRAPVGSDG  60
DHKAQHPNGH AQYVQAFGQA VRGKQQQPAM SSEEEAGYGE DVEEQARRRG VSQPSPSPSP  120
WQRMKWTDNM VRLLIKVVYR VGDDGGAGGE GEQQAHGALA KGKKSAAAAA ASALLQKKGK  180
WKSVSRAMME NGFCVSPQQC EDKFNDLNKR YKRVNDLLGK GTACRVVENQ TLLDTMDNLS  240
PKVKEEARKL LNSKHLFFSE MCAYHHAGGA SSCAAPPPPQ IPPPHPPDQQ QLCFHHPLPA  300
TAPPAKVPGD SRGRGTAAEE EGMAEEVDDE DDVDSEEDED DYEEEEDDDG VEGHGHKRHC  360
HHHQQQPKHE EGEEVEDSKG FTAGAKRLKK DSSQMSASPP HSLTLSSSSS IQQVLSEMMA  420
VSGGGEQQQR QWLRRKAAEL EEQRVAYQGR AFQLERQRFK WLRFSSNKER EMERMKLDNE  480
RLRLENGRML LLLRQKELEL VHGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10040.1	7e-50	Trihelix family protein