![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | RWW15124.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
|
||||||||
| Family | GATA | ||||||||
| Protein Properties | Length: 140aa MW: 15025.9 Da PI: 6.8468 | ||||||||
| Description | GATA family protein | ||||||||
| Gene Model |
|
||||||||
| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | GATA | 46.2 | 6.3e-15 | 95 | 131 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35
C+ Cg + Tp++Rrgp+g++tLCnaCG+ + k g+
RWW15124.1 95 CVRCGISAnaTPHMRRGPEGPRTLCNACGIAWTKVGT 131
9999988888***********************9875 PP
| |||||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 140 aa Download sequence |
MHCTCSQSSD DTSHGLPILF TCGGDGCSAT DATALLRLPS LTVARAHPSP RHRRRASHLA 60 NFNLLGVDAM QFEQDQDLEV HDNTGDDPSE VPPRCVRCGI SANATPHMRR GPEGPRTLCN 120 ACGIAWTKVG TSNFLFLVLG |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT4G24470.3 | 6e-13 | GATA family protein | ||||




