PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW15169.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 351aa MW: 37866 Da PI: 7.0104

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW15169.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.1	0.0012	4	26	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C ++Fs+ L H+r+H RWW15169.1 4 HTCNLCFRRFSNGRALGGHMRSH 26 79********************9 PP
2	zf-C2H2	12.2	0.00057	199	221	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+k+F++ L H +H RWW15169.1 199 YQCSTCKKVFRSYQALGGHRASH 221 9***********99999998887 PP
3	zf-C2H2	12.1	0.00058	253	275	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp C + Fs+ L +H r+H RWW15169.1 253 HECPLCFRAFSSGQALGSHKRSH 275 78*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MDRHTCNLCF RRFSNGRALG GHMRSHVIAA APLARPRSHG YSSDSTSSAQ PAAERVVEEV 60 EVEKEVGLCY GLRMNPRKSF RLVDPEFSSS TFAAVEAAGS CDVVQDGESE TESPRGQRRP 120 TKRPCRATAP PLDQPEGEPV SSVSDATPEE DIALCLMMLS RDSWAATAED RPLDGSDDED 180 DRRPATRSRP PPRKGRSRYQ CSTCKKVFRS YQALGGHRAS HKRTNGCRPV TEPRINSEAD 240 SVDVNADADA KVHECPLCFR AFSSGQALGS HKRSHLTSSA TTVAGNSPLA APPPPCSPPS 300 TSPVPVATKN EGNFGLIDLN LPAPEEDDAE LSAVESTQSV PTQPARRKHA I

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MDRHTCNLCF RRFSNGRALG GHMRSHVIAA APLARPRSHG YSSDSTSSAQ PAAERVVEEV  60
EVEKEVGLCY GLRMNPRKSF RLVDPEFSSS TFAAVEAAGS CDVVQDGESE TESPRGQRRP  120
TKRPCRATAP PLDQPEGEPV SSVSDATPEE DIALCLMMLS RDSWAATAED RPLDGSDDED  180
DRRPATRSRP PPRKGRSRYQ CSTCKKVFRS YQALGGHRAS HKRTNGCRPV TEPRINSEAD  240
SVDVNADADA KVHECPLCFR AFSSGQALGS HKRSHLTSSA TTVAGNSPLA APPPPCSPPS  300
TSPVPVATKN EGNFGLIDLN LPAPEEDDAE LSAVESTQSV PTQPARRKHA I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60580.1	8e-42	C2H2 family protein