PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW15632.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family HD-ZIP
Protein Properties Length: 487aa    MW: 55020.2 Da    PI: 5.2286
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW15632.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox21.15.4e-07731061346
                 HHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHH CS
    Homeobox  13 eeLeelFeknrypsaeereeLAkklgLterqVkv 46 
                   L +lF+ +++p++++r +L++ lgL+ rq+ v
  RWW15632.1  73 SLLLRLFKVCPHPDEKQRLQLSRDLGLEPRQINV 106
                 56889**************************976 PP
2START22.81.8e-08322398269
                 HHHHHHHHHHHHHHHC-TT-EEEE...EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCG CS
       START   2 laeeaaqelvkkalaeepgWvkss...esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddk 69 
                 +a +a++e++++++ +ep+Wvkss   ++++ +++ + f++ +        ++ea+r+s++v+m +++l   ++d +
  RWW15632.1 322 MATTAMEEVIRLVQTNEPLWVKSSdgrDILQLETYNRMFQRPGRqlkfpgTRIEASRDSALVIMGAMTLIDMFMDAM 398
                 57899*******************999777778887777554447899**********************9999987 PP
3START63.95e-2139846994165
                 EEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEE CS
       START  94 mvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvt 165
                 m+ e q+lsp+vp R+f+f+R+++q + g wv++dvSvd +++++  + +  +++l Sg+l+e++sng++kv 
  RWW15632.1 398 MYEEIQVLSPVVPmREFYFLRSCQQIEPGMWVVADVSVDYPRDNQ-LALSSQSRRLASGYLMEEMSNGYTKVM 469
                 88999****************************************.677778889****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 487 aa     Download sequence    
MDSGDEQDVP NSQSRKKRYH RHTPRQIQEL ESYALFSSIS FSLYVCVLSG HCVVLFYGLG  60
VFVAALSDEV SVSLLLRLFK VCPHPDEKQR LQLSRDLGLE PRQINVIDAE KKLDFGASQT  120
KKGPSLHRLI DSGAWQGQQE RSDNCLLRAE NDKIRCENIA MREALKNVIC PSCGSPPPDD  180
DSYFDEQKLR MDNTRLKEEV IPSSLSLWRF TGDDQFSLVQ LSLFSHLDPA ICLMQLLIVV  240
RGIMLDRVSS LASKYLGRPL TQLPPVQPVS ISSLDLSAGG YGDTGISPSL DLDLLCRNSS  300
SAFPFQFPST VSEHEKPLMV EMATTAMEEV IRLVQTNEPL WVKSSDGRDI LQLETYNRMF  360
QRPGRQLKFP GTRIEASRDS ALVIMGAMTL IDMFMDAMYE EIQVLSPVVP MREFYFLRSC  420
QQIEPGMWVV ADVSVDYPRD NQLALSSQSR RLASGYLMEE MSNGYTKVME IWFLCLHNVH  480
SLLVSLP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.13e-85HD-ZIP family protein