PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW15690.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

YABBY

Protein Properties

Length: 185aa MW: 20542.3 Da PI: 8.6241

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW15690.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	216.5	8.4e-67	2	155	2	170
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssek 100 + + +e++Cyv+CnfCnt+lavsvP +s+f++v+vrCGhC++llsvnl q l+ ++ ++ ++ +++ ++ ++ s + s + RWW15690.1 2 SAQVLPEHICYVHCNFCNTVLAVSVPGNSSFNIVAVRCGHCSNLLSVNLGDLLQRLPFQDF--------QTSNTAAQGSRMECGSPSRFSRASLLS--T 90 567889*************************************************9996........444555555555544443333333333..3 PP YABBY 101 lsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 +++++++ +p +rPPekrqrvPsaynrfikeeiqrika+nPdishreafs+aaknWahfP+i fgl RWW15690.1 91 MPNHQEQMLP-----MRPPEKRQRVPSAYNRFIKEEIQRIKAKNPDISHREAFSTAAKNWAHFPHIQFGL 155 5666666555.....7**************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 185 aa Download sequence
MSAQVLPEHI CYVHCNFCNT VLAVSVPGNS SFNIVAVRCG HCSNLLSVNL GDLLQRLPFQ 60 DFQTSNTAAQ GSRMECGSPS RFSRASLLST MPNHQEQMLP MRPPEKRQRV PSAYNRFIKE 120 EIQRIKAKNP DISHREAFST AAKNWAHFPH IQFGLTVDGN KQPETDEPVA ATVTAPGSQK 180 AQSFF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08465.1	8e-67	YABBY family protein