PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW15898.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

YABBY

Protein Properties

Length: 208aa MW: 22896.2 Da PI: 8.0758

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW15898.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	166.6	1.8e-51	9	158	5	168
YABBY 5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklse 103 + +eq+ yvqC+fC t+l+vsvP +sl+kvvtvrCGhCtsllsv+l +s ++++e ll+ l++ee + + +k s+ v +e RWW15898.1 9 ELPEQLGYVQCSFCATLLLVSVPCSSLLKVVTVRCGHCTSLLSVSLVRTS-VVPVE----------LLASLGDEEGKPEDLGVKACSSGGVVGG---EE 93 689**************************************9987654.33433..........3444444444444444443333333333...67 PP YABBY 104 nedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihf 168 ne+++ +r+p +++PPekrqr+Psayn fi+eei rika P+i+h+eafsaaaknWahfP+ih+ RWW15898.1 94 NETKSPTRAPIINKPPEKRQRAPSAYNHFIREEIVRIKAREPNITHKEAFSAAAKNWAHFPRIHH 158 89999999999***************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 208 aa Download sequence
MSSSNPLLEL PEQLGYVQCS FCATLLLVSV PCSSLLKVVT VRCGHCTSLL SVSLVRTSVV 60 PVELLASLGD EEGKPEDLGV KACSSGGVVG GEENETKSPT RAPIINKPPE KRQRAPSAYN 120 HFIREEIVRI KAREPNITHK EAFSAAAKNW AHFPRIHHNE DGKSYSSREG KKIFDGHVDE 180 EVKYLCANST FFFFFKGIIR SSTHLNVP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23420.1	3e-32	YABBY family protein