PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW15979.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 200aa MW: 23030.9 Da PI: 10.2554

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW15979.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18	7.7e-06	24	46	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H RWW15979.1 24 FICEVCNKGFQREQNLQLHRRGH 46 89*******************88 PP
2	zf-C2H2	17.6	1e-05	100	122	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k++ +s+Lk H +t+ RWW15979.1 100 WKCDKCSKRYAVQSDLKAHSKTC 122 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 200 aa Download sequence
MCVADPDAEV IALSPKTLLA TNRFICEVCN KGFQREQNLQ LHRRGHNLPW KLRLKSSKEV 60 RRRVYLCPEP TCVHHDPSRA LGDLTGIKKH FCRKHGEKKW KCDKCSKRYA VQSDLKAHSK 120 TCGTREYRCD CGTLFSRFVM VGFPRRRGKG TYVLGNVCRE LLSRELVCRI AMVIEVSTPS 180 KGLNLFSPHW NHRHPSSDLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02070.1	8e-91	C2H2 family protein