PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW16028.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 255aa MW: 28953.6 Da PI: 8.315

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW16028.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.3	4.8e-15	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W+++Ed++l d++ q+G +W++++++ g+ R +k+c++rw +yl RWW16028.1 15 KGLWSPDEDQKLRDYILQHGVSCWSAVPAKAGLQRNGKSCRLRWINYL 62 678*******************************************97 PP
2	Myb_DNA-binding	56	8.8e-18	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE+e +v++ +lG++ W+ Ia +++ gRt++++k+ w++yl RWW16028.1 68 RGNFSPEEEETIVKLQSKLGNK-WSQIAMHLP-GRTDNEVKNQWNSYL 113 89******************.*****.***********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence
MECKNCKKPE VDCRKGLWSP DEDQKLRDYI LQHGVSCWSA VPAKAGLQRN GKSCRLRWIN 60 YLRPGLKRGN FSPEEEETIV KLQSKLGNKW SQIAMHLPGR TDNEVKNQWN SYLKKKIIKP 120 QELDTSISAS SALNLIIQRI TMHKTEKDHV VPSAAGRYTE ALESCLKNYD QSVTQNIGGG 180 SPNRTAADQF SNVLFPDCLS FEQANWDSLF NLDDAISNQW HCKNFYTASQ VDAQYGNNVI 240 VPNGFRFTNT CGQFE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25560.1	2e-55	MYB family protein