PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW16036.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

TCP

Protein Properties

Length: 452aa MW: 49447.4 Da PI: 9.2694

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW16036.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	132.9	3e-41	81	218	2	131
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.............ssssasec..eaesssssasns 85 g+kdrhsk++T++g+RdRRvRls+++a++f+dLqd+LG+d++sk+ieWL+++a +ai el+ + + + ++++ +s++n+ RWW16036.1 81 SGGKDRHSKVYTARGLRDRRVRLSVSTAIQFYDLQDRLGYDQPSKAIEWLIKAAAAAINELPPLdgfpkppyptrveT------MkaNPDT--ESSHNQ 171 689***********************************************************98876655433321......1222222..222222 PP TCP 86 ssgkaaksaakskksqksaasalnlak.esrakarararertrekmr 131 ++++ ++++ +s+ s++s+ s+l+l++ esr kar+rarer +++++ RWW16036.1 172 QQQHMSTKSGCSSTSETSKGSVLSLSRsESRIKARERARERAAKDKS 218 233445666699999***********************8776654 PP

Sequence ? help Back to Top
Protein Sequence Length: 452 aa Download sequence
MLCPAQERHE NKMELEESNH SSKRFRVVVN GSQTAKIGRK EHRKDDEEDR ERKGRRGDDA 60 SGTGPWEPHL SSRIFRVSRA SGGKDRHSKV YTARGLRDRR VRLSVSTAIQ FYDLQDRLGY 120 DQPSKAIEWL IKAAAAAINE LPPLDGFPKP PYPTRVETMK ANPDTESSHN QQQQHMSTKS 180 GCSSTSETSK GSVLSLSRSE SRIKARERAR ERAAKDKSKY RDDGGHHVVS RHQNLNHSLN 240 PQTSFTELLT GSGGGGVSNN ANATTVAAGE ENTGRNCIAK QIPTADYFVQ AGLFTQPRES 300 HQHPPTFSSQ SHFGNSSPMG LLPFNITATS DHPEMQQLFL QDNLFPISAV AATGDYNLSF 360 SISSGIAGFS RGTLQSNSPA QLPQQHHHND NHLPRLSSTV DGSNLQFFGA AAGSAAAAGA 420 ENQYPAECDG RLQLCYGGDG YRHSELKGKG KS

Sequence ? help Back to Top

Protein Sequence Length: 452 aa Download sequence

MLCPAQERHE NKMELEESNH SSKRFRVVVN GSQTAKIGRK EHRKDDEEDR ERKGRRGDDA  60
SGTGPWEPHL SSRIFRVSRA SGGKDRHSKV YTARGLRDRR VRLSVSTAIQ FYDLQDRLGY  120
DQPSKAIEWL IKAAAAAINE LPPLDGFPKP PYPTRVETMK ANPDTESSHN QQQQHMSTKS  180
GCSSTSETSK GSVLSLSRSE SRIKARERAR ERAAKDKSKY RDDGGHHVVS RHQNLNHSLN  240
PQTSFTELLT GSGGGGVSNN ANATTVAAGE ENTGRNCIAK QIPTADYFVQ AGLFTQPRES  300
HQHPPTFSSQ SHFGNSSPMG LLPFNITATS DHPEMQQLFL QDNLFPISAV AATGDYNLSF  360
SISSGIAGFS RGTLQSNSPA QLPQQHHHND NHLPRLSSTV DGSNLQFFGA AAGSAAAAGA  420
ENQYPAECDG RLQLCYGGDG YRHSELKGKG KS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18390.1	3e-38	TCP family protein