PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW16224.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family LBD
Protein Properties Length: 197aa    MW: 20564.3 Da    PI: 7.4358
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW16224.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260117.67.6e-3723110187
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqql 87 
                 +C aCk+lrrkC+++C++apyf +eq +++fa+vhk+FGasn +kll ++p ++r da+ +++yeA+ar+rdPvyG+v++i++lqqql
  RWW16224.1  23 PCGACKFLRRKCVTGCIFAPYFDSEQgAAHFAAVHKVFGASNASKLLLHIPAHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQL 110
                 7***********************9989**********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MSGSIAPNGG GGGGSGGGGG GGPCGACKFL RRKCVTGCIF APYFDSEQGA AHFAAVHKVF  60
GASNASKLLL HIPAHKRLDA VVTICYEAQA RLRDPVYGCV AHIFALQQQL PIPFSMSDLS  120
SSSTLPSTAD LSTLFDPPLL PSWPLQQQQR ITSTRSLSES SGCGGGDLQE LARELLLGRH  180
RLGDVIDEPG VQESKSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45420.14e-52LBD family protein