PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW16239.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 221aa MW: 24061.9 Da PI: 6.8573

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW16239.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13	0.00031	81	103	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C + F ++ L H++ H RWW16239.1 81 FSCNYCQRQFFSSQALGGHQNAH 103 89*****************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 221 aa Download sequence
MSSSNPEASL DDLEESSQVA SNTCIQETSP SLGKEDVPIS LNLSLSINAD STAPAVVSLS 60 STSESSSESQ AFRAHNPRRV FSCNYCQRQF FSSQALGGHQ NAHKRERTLA KRALGLAAFP 120 HNYSSIASLP LHGSALHSLG IKAHSSMHQR VMKWRESPGA KLLGRGLLEP RPLFLDDHDV 180 EFFWPGSFRP VAASSFELLG SANLVKLDHQ PAEEPDLTLR L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66140.1	1e-31	C2H2 family protein