PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW16486.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family YABBY
Protein Properties Length: 162aa    MW: 17958.2 Da    PI: 7.846
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW16486.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY102.49.2e-32211833162
       YABBY  33 kvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklsenedeevprvppvirPPekrqrvPsaynr 131
                  +vtvrCGhC +l  ++   + ++++++s  d+      +  l+v  + + s  + + s+s+s s    s+++++ ++++  v++PPek+ r+Psaynr
  RWW16486.1   2 DTVTVRCGHCNHLSFLS---SRTMVPSHSCNDH------QMGLQVCISLFLSLASGQASPSSSSS----STSSEQTTQKPTFVVKPPEKKHRMPSAYNR 87 
                 68********9865433...3334444443222......33344444445555554444444444....4555666666678***************** PP

       YABBY 132 fikeeiqrikasnPdishreafsaaaknWah 162
                 f++eeiqrikas Pdi hreafs+aaknWa 
  RWW16486.1  88 FMREEIQRIKASKPDIPHREAFSMAAKNWAK 118
                 *****************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    
MDTVTVRCGH CNHLSFLSSR TMVPSHSCND HQMGLQVCIS LFLSLASGQA SPSSSSSSTS  60
SEQTTQKPTF VVKPPEKKHR MPSAYNRFMR EEIQRIKASK PDIPHREAFS MAAKNWAKCD  120
PRCSIIVSAS GDDKLSPAEQ VERSSSPTME SSSLYKQMEE ED
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69180.13e-34YABBY family protein