PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW16511.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

ERF

Protein Properties

Length: 601aa MW: 65313.6 Da PI: 10.3606

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW16511.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	65.7	9.5e-21	368	417	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr ++ +gr++AeIrdp +k+ r++lg+fgtaeeAa+a++aa+++++g RWW16511.1 368 HFRGVRKRP-WGRYAAEIRDP---NKKSRVWLGTFGTAEEAARAYDAAAREFRG 417 69*****.******9...347***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 601 aa Download sequence
MSDAHLSLFS LKLSISASYA QCLSKTHPMP QACKFKQFQG DRRPKGTDLR ACKLTKTRIE 60 AANEVQPEEL KECFFEGEND RVTYGPTNSL RPCRLPRLYL SIEILGDSAT RDAPRLTHNR 120 SNFWYKVDIR TGYIRALHTV IILRGVVGVR NPLAVRFPDG RHQPRTLTFP PPPNQICRSN 180 CATSTQETFP RDTEDRGNVA DRRHVFSGSA WFRTTVGRID RANPSSRPHS MIRISIGGPV 240 RCRHTVGPAT SSTHPPTHTV SKRYATLRPS LTRFSYVSAV IAEIAEAAAK GVSRLPRATY 300 TAHELVVISA CKGAANEMTC NVQKKRKRTV AGGAAKESQN SQPDLGFVTM APRGKATTVG 360 DGGGKEAHFR GVRKRPWGRY AAEIRDPNKK SRVWLGTFGT AEEAARAYDA AAREFRGPKA 420 KTNFPHPDAS NGPRGADGGG GTGSSSSQSS TVENSGPEEA AAAMPSLPAP LPPSPDINLI 480 YRGHGGARFP FQPYSPVISA AQPFFFLNAV ARSENFHTSD ASVTAYHRQL PLCQPTIITC 540 WHPRPPVTVA AATATATQSD SDSSSVVDHH PDHRSPPSPS ASPKSFALHL DLNLPPPLDT 600 A

Sequence ? help Back to Top

Protein Sequence Length: 601 aa Download sequence

MSDAHLSLFS LKLSISASYA QCLSKTHPMP QACKFKQFQG DRRPKGTDLR ACKLTKTRIE  60
AANEVQPEEL KECFFEGEND RVTYGPTNSL RPCRLPRLYL SIEILGDSAT RDAPRLTHNR  120
SNFWYKVDIR TGYIRALHTV IILRGVVGVR NPLAVRFPDG RHQPRTLTFP PPPNQICRSN  180
CATSTQETFP RDTEDRGNVA DRRHVFSGSA WFRTTVGRID RANPSSRPHS MIRISIGGPV  240
RCRHTVGPAT SSTHPPTHTV SKRYATLRPS LTRFSYVSAV IAEIAEAAAK GVSRLPRATY  300
TAHELVVISA CKGAANEMTC NVQKKRKRTV AGGAAKESQN SQPDLGFVTM APRGKATTVG  360
DGGGKEAHFR GVRKRPWGRY AAEIRDPNKK SRVWLGTFGT AEEAARAYDA AAREFRGPKA  420
KTNFPHPDAS NGPRGADGGG GTGSSSSQSS TVENSGPEEA AAAMPSLPAP LPPSPDINLI  480
YRGHGGARFP FQPYSPVISA AQPFFFLNAV ARSENFHTSD ASVTAYHRQL PLCQPTIITC  540
WHPRPPVTVA AATATATQSD SDSSSVVDHH PDHRSPPSPS ASPKSFALHL DLNLPPPLDT  600
A

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	324	329	KKRKRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44210.1	5e-23	ERF family protein