PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW16524.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 481aa MW: 52881.9 Da PI: 9.8111

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW16524.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.2	6.9e-06	258	280	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +CpdCg++F r+++L+ H+ H RWW16524.1 258 PCPDCGEVFLRSETLELHQAIsH 280 7******************9877 PP

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence
MPSDNDRGDQ TKITTSPLRS KKAKALIQFR NQKKRGVLHD RNRKENNRKT TYSEEAEEDA 60 VIDRITGTTD ERAGGRRKPR REYTARDTGV GASVTPASGL TAGNQRRERK HGDEGSLRSR 120 LPMVADAVDQ NDVQGKKKSN KTSCSVSFCR MRNSPSVVKP EITAPESSKR LAATNSLNTP 180 NRSFRSPSKD VGGAISTSFS SHSSASITAS VTSSSSSLGG SFKGMHLRKL SGCYECHVMT 240 DPINGPSRDA SMRATICPCP DCGEVFLRSE TLELHQAISH AVSELGPEDT SRNIIEIIFQ 300 SSWLKNQTPV CKIDRILKVH NTQKAITRFE DYRDSIKMKA NKLGKKHPRC VADGNELLRF 360 YSTTCACSLG LHRSTNLCQS IKHCSVCSII RDGFKVDELG KILTMATSGK AHDMAHASSD 420 DEKRAMLVCR VIAGRVKKSQ EAAEDFDSVT GVAGTYSNMD ELFVFSPKAI LPCFVVIYRS 480 F

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence

MPSDNDRGDQ TKITTSPLRS KKAKALIQFR NQKKRGVLHD RNRKENNRKT TYSEEAEEDA  60
VIDRITGTTD ERAGGRRKPR REYTARDTGV GASVTPASGL TAGNQRRERK HGDEGSLRSR  120
LPMVADAVDQ NDVQGKKKSN KTSCSVSFCR MRNSPSVVKP EITAPESSKR LAATNSLNTP  180
NRSFRSPSKD VGGAISTSFS SHSSASITAS VTSSSSSLGG SFKGMHLRKL SGCYECHVMT  240
DPINGPSRDA SMRATICPCP DCGEVFLRSE TLELHQAISH AVSELGPEDT SRNIIEIIFQ  300
SSWLKNQTPV CKIDRILKVH NTQKAITRFE DYRDSIKMKA NKLGKKHPRC VADGNELLRF  360
YSTTCACSLG LHRSTNLCQS IKHCSVCSII RDGFKVDELG KILTMATSGK AHDMAHASSD  420
DEKRAMLVCR VIAGRVKKSQ EAAEDFDSVT GVAGTYSNMD ELFVFSPKAI LPCFVVIYRS  480
F

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	106	141	RRERKHGDEGSLRSRLPMVADAVDQNDVQGKKKSNK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75710.1	1e-93	C2H2 family protein