PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW16660.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family C3H
Protein Properties Length: 211aa    MW: 23323.8 Da    PI: 4.3179
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW16660.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH29.61.2e-093156227
                -S---SGGGGTS--TTTTT-SS-SSS CS
     zf-CCCH  2 ktelCrffartGtCkyGdrCkFaHgp 27
                +++ C +++rtGtC +Gd C+++H++
  RWW16660.1 31 GRPDCAYYMRTGTCGFGDGCRYNHPR 56
                589*********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MFSFWCCVVA GSMWKMELGS EEPPAYPERH GRPDCAYYMR TGTCGFGDGC RYNHPRDRRM  60
STIAPSHQQY PVITSWEVAR SSMLPPSYMQ GPYGPMLLFP GIMPDPGWST FPVTPSPPMS  120
TGGEQNTVLE ESQYDSAAQT SRLHPAHSKS YPMAVSDWNS ESERNEDFEW DSDDEATTGD  180
DAPSSDPPAC PPGEVVLSSP WRSGPSNLAL I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47850.22e-20C3H family protein